Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smg1Q8BKX6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smg1Q8BKX6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smg1Q8BKX6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smg1Q8BKX6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smg1Q8BKX6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.41■□□□□ 0.7
Smg1Q8BKX6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smg1Q8BKX6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smg1Q8BKX6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Smg1Q8BKX6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smg1Q8BKX6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smg1Q8BKX6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg1Q8BKX6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smg1Q8BKX6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smg1Q8BKX6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.39■□□□□ 0.69
Smg1Q8BKX6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smg1Q8BKX6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smg1Q8BKX6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smg1Q8BKX6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smg1Q8BKX6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.37■□□□□ 0.69
Smg1Q8BKX6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg1Q8BKX6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg1Q8BKX6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.36■□□□□ 0.69
Smg1Q8BKX6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.36■□□□□ 0.69
Smg1Q8BKX6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg1Q8BKX6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.35■□□□□ 0.69
Smg1Q8BKX6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg1Q8BKX6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg1Q8BKX6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg1Q8BKX6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg1Q8BKX6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smg1Q8BKX6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Smg1Q8BKX6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.34■□□□□ 0.69
Smg1Q8BKX6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.33■□□□□ 0.69
Smg1Q8BKX6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smg1Q8BKX6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smg1Q8BKX6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Smg1Q8BKX6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smg1Q8BKX6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Smg1Q8BKX6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smg1Q8BKX6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smg1Q8BKX6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smg1Q8BKX6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smg1Q8BKX6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smg1Q8BKX6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smg1Q8BKX6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.31■□□□□ 0.68
Smg1Q8BKX6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.31■□□□□ 0.68
Smg1Q8BKX6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smg1Q8BKX6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smg1Q8BKX6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smg1Q8BKX6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.3■□□□□ 0.68
Smg1Q8BKX6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smg1Q8BKX6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smg1Q8BKX6 Terc-201ENSMUST00000082862 423 ntBASIC19.29■□□□□ 0.68
Smg1Q8BKX6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smg1Q8BKX6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smg1Q8BKX6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smg1Q8BKX6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smg1Q8BKX6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smg1Q8BKX6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.28■□□□□ 0.68
Smg1Q8BKX6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg1Q8BKX6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg1Q8BKX6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smg1Q8BKX6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smg1Q8BKX6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.27■□□□□ 0.68
Smg1Q8BKX6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smg1Q8BKX6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smg1Q8BKX6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
Smg1Q8BKX6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smg1Q8BKX6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smg1Q8BKX6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Smg1Q8BKX6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.26■□□□□ 0.67
Smg1Q8BKX6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smg1Q8BKX6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg1Q8BKX6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg1Q8BKX6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Smg1Q8BKX6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smg1Q8BKX6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Smg1Q8BKX6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smg1Q8BKX6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg1Q8BKX6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg1Q8BKX6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smg1Q8BKX6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg1Q8BKX6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smg1Q8BKX6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smg1Q8BKX6 Gm44428-201ENSMUST00000204474 874 ntBASIC19.23■□□□□ 0.67
Smg1Q8BKX6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smg1Q8BKX6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smg1Q8BKX6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg1Q8BKX6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Smg1Q8BKX6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.22■□□□□ 0.67
Smg1Q8BKX6 Gm29257-201ENSMUST00000186115 639 ntBASIC19.22■□□□□ 0.67
Smg1Q8BKX6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg1Q8BKX6 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.22■□□□□ 0.67
Smg1Q8BKX6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smg1Q8BKX6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg1Q8BKX6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.21■□□□□ 0.67
Smg1Q8BKX6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg1Q8BKX6 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.21■□□□□ 0.67
Smg1Q8BKX6 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms