Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chmp2bQ8BJF9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chmp2bQ8BJF9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp2bQ8BJF9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp2bQ8BJF9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chmp2bQ8BJF9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.71■■□□□ 1.23
Chmp2bQ8BJF9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Chmp2bQ8BJF9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Chmp2bQ8BJF9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Chmp2bQ8BJF9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Chmp2bQ8BJF9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chmp2bQ8BJF9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chmp2bQ8BJF9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.69■■□□□ 1.22
Chmp2bQ8BJF9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp2bQ8BJF9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Chmp2bQ8BJF9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp2bQ8BJF9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.68■■□□□ 1.22
Chmp2bQ8BJF9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp2bQ8BJF9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chmp2bQ8BJF9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp2bQ8BJF9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp2bQ8BJF9 Gm8503-201ENSMUST00000118131 455 ntBASIC22.67■■□□□ 1.22
Chmp2bQ8BJF9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.67■■□□□ 1.22
Chmp2bQ8BJF9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Chmp2bQ8BJF9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp2bQ8BJF9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp2bQ8BJF9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Chmp2bQ8BJF9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp2bQ8BJF9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp2bQ8BJF9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp2bQ8BJF9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
Chmp2bQ8BJF9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp2bQ8BJF9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp2bQ8BJF9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp2bQ8BJF9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp2bQ8BJF9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp2bQ8BJF9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Chmp2bQ8BJF9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp2bQ8BJF9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.65■■□□□ 1.22
Chmp2bQ8BJF9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp2bQ8BJF9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp2bQ8BJF9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp2bQ8BJF9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chmp2bQ8BJF9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Chmp2bQ8BJF9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp2bQ8BJF9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp2bQ8BJF9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp2bQ8BJF9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.63■■□□□ 1.21
Chmp2bQ8BJF9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp2bQ8BJF9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp2bQ8BJF9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp2bQ8BJF9 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.63■■□□□ 1.21
Chmp2bQ8BJF9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp2bQ8BJF9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp2bQ8BJF9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp2bQ8BJF9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
Chmp2bQ8BJF9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp2bQ8BJF9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.62■■□□□ 1.21
Chmp2bQ8BJF9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp2bQ8BJF9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp2bQ8BJF9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Chmp2bQ8BJF9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.61■■□□□ 1.21
Chmp2bQ8BJF9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chmp2bQ8BJF9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.61■■□□□ 1.21
Chmp2bQ8BJF9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Chmp2bQ8BJF9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Chmp2bQ8BJF9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chmp2bQ8BJF9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chmp2bQ8BJF9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chmp2bQ8BJF9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp2bQ8BJF9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.59■■□□□ 1.21
Chmp2bQ8BJF9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Chmp2bQ8BJF9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp2bQ8BJF9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp2bQ8BJF9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Chmp2bQ8BJF9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Chmp2bQ8BJF9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Chmp2bQ8BJF9 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.57■■□□□ 1.2
Chmp2bQ8BJF9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Chmp2bQ8BJF9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp2bQ8BJF9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp2bQ8BJF9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.57■■□□□ 1.2
Chmp2bQ8BJF9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp2bQ8BJF9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Chmp2bQ8BJF9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Chmp2bQ8BJF9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.57■■□□□ 1.2
Chmp2bQ8BJF9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.56■■□□□ 1.2
Chmp2bQ8BJF9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chmp2bQ8BJF9 Gm4799-201ENSMUST00000095396 657 ntBASIC22.56■■□□□ 1.2
Chmp2bQ8BJF9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp2bQ8BJF9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp2bQ8BJF9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.55■■□□□ 1.2
Chmp2bQ8BJF9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Chmp2bQ8BJF9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp2bQ8BJF9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Chmp2bQ8BJF9 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.55■■□□□ 1.2
Chmp2bQ8BJF9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.54■■□□□ 1.2
Chmp2bQ8BJF9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.54■■□□□ 1.2
Chmp2bQ8BJF9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Chmp2bQ8BJF9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms