Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4dQ8BGV9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atg4dQ8BGV9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Atg4dQ8BGV9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4dQ8BGV9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Atg4dQ8BGV9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.96■□□□□ 0.95
Atg4dQ8BGV9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.96■□□□□ 0.95
Atg4dQ8BGV9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Atg4dQ8BGV9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Atg4dQ8BGV9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4dQ8BGV9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4dQ8BGV9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4dQ8BGV9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4dQ8BGV9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4dQ8BGV9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atg4dQ8BGV9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.95■□□□□ 0.94
Atg4dQ8BGV9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Atg4dQ8BGV9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Atg4dQ8BGV9 Gm14523-201ENSMUST00000117260 558 ntBASIC20.93■□□□□ 0.94
Atg4dQ8BGV9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.93■□□□□ 0.94
Atg4dQ8BGV9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.93■□□□□ 0.94
Atg4dQ8BGV9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Atg4dQ8BGV9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atg4dQ8BGV9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atg4dQ8BGV9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atg4dQ8BGV9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atg4dQ8BGV9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.91■□□□□ 0.94
Atg4dQ8BGV9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Atg4dQ8BGV9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.91■□□□□ 0.94
Atg4dQ8BGV9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atg4dQ8BGV9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.91■□□□□ 0.94
Atg4dQ8BGV9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atg4dQ8BGV9 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.9■□□□□ 0.94
Atg4dQ8BGV9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atg4dQ8BGV9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atg4dQ8BGV9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Atg4dQ8BGV9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Atg4dQ8BGV9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atg4dQ8BGV9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Atg4dQ8BGV9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atg4dQ8BGV9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Atg4dQ8BGV9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atg4dQ8BGV9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atg4dQ8BGV9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.88■□□□□ 0.93
Atg4dQ8BGV9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atg4dQ8BGV9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atg4dQ8BGV9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atg4dQ8BGV9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atg4dQ8BGV9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atg4dQ8BGV9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.87■□□□□ 0.93
Atg4dQ8BGV9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atg4dQ8BGV9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atg4dQ8BGV9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atg4dQ8BGV9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atg4dQ8BGV9 Cap2-205ENSMUST00000225824 1634 ntBASIC20.86■□□□□ 0.93
Atg4dQ8BGV9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.86■□□□□ 0.93
Atg4dQ8BGV9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atg4dQ8BGV9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.85■□□□□ 0.93
Atg4dQ8BGV9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4dQ8BGV9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.85■□□□□ 0.93
Atg4dQ8BGV9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4dQ8BGV9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4dQ8BGV9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.84■□□□□ 0.93
Atg4dQ8BGV9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.84■□□□□ 0.93
Atg4dQ8BGV9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Atg4dQ8BGV9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Atg4dQ8BGV9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Atg4dQ8BGV9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4dQ8BGV9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4dQ8BGV9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4dQ8BGV9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.83■□□□□ 0.93
Atg4dQ8BGV9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Atg4dQ8BGV9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atg4dQ8BGV9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atg4dQ8BGV9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4dQ8BGV9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4dQ8BGV9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4dQ8BGV9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4dQ8BGV9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4dQ8BGV9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4dQ8BGV9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4dQ8BGV9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4dQ8BGV9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4dQ8BGV9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4dQ8BGV9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4dQ8BGV9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Atg4dQ8BGV9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4dQ8BGV9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4dQ8BGV9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Atg4dQ8BGV9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms