Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krr1Q8BGA5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krr1Q8BGA5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krr1Q8BGA5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krr1Q8BGA5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.93■□□□□ 0.94
Krr1Q8BGA5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krr1Q8BGA5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Krr1Q8BGA5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krr1Q8BGA5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krr1Q8BGA5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krr1Q8BGA5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Krr1Q8BGA5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krr1Q8BGA5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krr1Q8BGA5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krr1Q8BGA5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krr1Q8BGA5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Krr1Q8BGA5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krr1Q8BGA5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krr1Q8BGA5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krr1Q8BGA5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Krr1Q8BGA5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Krr1Q8BGA5 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.9■□□□□ 0.94
Krr1Q8BGA5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krr1Q8BGA5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krr1Q8BGA5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Krr1Q8BGA5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Krr1Q8BGA5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Krr1Q8BGA5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Krr1Q8BGA5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Krr1Q8BGA5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Krr1Q8BGA5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krr1Q8BGA5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.88■□□□□ 0.93
Krr1Q8BGA5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krr1Q8BGA5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krr1Q8BGA5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krr1Q8BGA5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.88■□□□□ 0.93
Krr1Q8BGA5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krr1Q8BGA5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.87■□□□□ 0.93
Krr1Q8BGA5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Krr1Q8BGA5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krr1Q8BGA5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krr1Q8BGA5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krr1Q8BGA5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krr1Q8BGA5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krr1Q8BGA5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krr1Q8BGA5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.86■□□□□ 0.93
Krr1Q8BGA5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
Krr1Q8BGA5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Krr1Q8BGA5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krr1Q8BGA5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Krr1Q8BGA5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krr1Q8BGA5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krr1Q8BGA5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krr1Q8BGA5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krr1Q8BGA5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krr1Q8BGA5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krr1Q8BGA5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.84■□□□□ 0.93
Krr1Q8BGA5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Krr1Q8BGA5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krr1Q8BGA5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Krr1Q8BGA5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Krr1Q8BGA5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Krr1Q8BGA5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Krr1Q8BGA5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Krr1Q8BGA5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krr1Q8BGA5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krr1Q8BGA5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krr1Q8BGA5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krr1Q8BGA5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Krr1Q8BGA5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krr1Q8BGA5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krr1Q8BGA5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krr1Q8BGA5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Krr1Q8BGA5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Krr1Q8BGA5 Notumos-201ENSMUST00000151998 2659 ntBASIC20.8■□□□□ 0.92
Krr1Q8BGA5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krr1Q8BGA5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krr1Q8BGA5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.79■□□□□ 0.92
Krr1Q8BGA5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krr1Q8BGA5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krr1Q8BGA5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krr1Q8BGA5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krr1Q8BGA5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krr1Q8BGA5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Krr1Q8BGA5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
Krr1Q8BGA5 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.78■□□□□ 0.92
Krr1Q8BGA5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Krr1Q8BGA5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Krr1Q8BGA5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Krr1Q8BGA5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms