Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ubp1Q811S7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubp1Q811S7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubp1Q811S7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubp1Q811S7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubp1Q811S7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Ubp1Q811S7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.89■■□□□ 1.09
Ubp1Q811S7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubp1Q811S7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Ubp1Q811S7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubp1Q811S7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubp1Q811S7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ubp1Q811S7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ubp1Q811S7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubp1Q811S7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubp1Q811S7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ubp1Q811S7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubp1Q811S7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ubp1Q811S7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubp1Q811S7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.86■■□□□ 1.09
Ubp1Q811S7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubp1Q811S7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubp1Q811S7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubp1Q811S7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.85■■□□□ 1.09
Ubp1Q811S7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ubp1Q811S7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ubp1Q811S7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubp1Q811S7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubp1Q811S7 Gm44428-201ENSMUST00000204474 874 ntBASIC21.84■■□□□ 1.09
Ubp1Q811S7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubp1Q811S7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubp1Q811S7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Ubp1Q811S7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubp1Q811S7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Ubp1Q811S7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubp1Q811S7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ubp1Q811S7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ubp1Q811S7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ubp1Q811S7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.83■■□□□ 1.09
Ubp1Q811S7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.83■■□□□ 1.09
Ubp1Q811S7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubp1Q811S7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubp1Q811S7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Ubp1Q811S7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Ubp1Q811S7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubp1Q811S7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubp1Q811S7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ubp1Q811S7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.82■■□□□ 1.08
Ubp1Q811S7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubp1Q811S7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubp1Q811S7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ubp1Q811S7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubp1Q811S7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Ubp1Q811S7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ubp1Q811S7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ubp1Q811S7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.8■■□□□ 1.08
Ubp1Q811S7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubp1Q811S7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.8■■□□□ 1.08
Ubp1Q811S7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubp1Q811S7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.8■■□□□ 1.08
Ubp1Q811S7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ubp1Q811S7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ubp1Q811S7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Ubp1Q811S7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.79■■□□□ 1.08
Ubp1Q811S7 Gm12366-201ENSMUST00000121722 873 ntBASIC21.79■■□□□ 1.08
Ubp1Q811S7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.79■■□□□ 1.08
Ubp1Q811S7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ubp1Q811S7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubp1Q811S7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.79■■□□□ 1.08
Ubp1Q811S7 Gm5786-201ENSMUST00000085368 882 ntBASIC21.79■■□□□ 1.08
Ubp1Q811S7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Ubp1Q811S7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubp1Q811S7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubp1Q811S7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubp1Q811S7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubp1Q811S7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubp1Q811S7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubp1Q811S7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.78■■□□□ 1.08
Ubp1Q811S7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ubp1Q811S7 Cap2-205ENSMUST00000225824 1634 ntBASIC21.77■■□□□ 1.08
Ubp1Q811S7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubp1Q811S7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ubp1Q811S7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubp1Q811S7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.77■■□□□ 1.08
Ubp1Q811S7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubp1Q811S7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubp1Q811S7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.77■■□□□ 1.07
Ubp1Q811S7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.76■■□□□ 1.07
Ubp1Q811S7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ubp1Q811S7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.76■■□□□ 1.07
Ubp1Q811S7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ubp1Q811S7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ubp1Q811S7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubp1Q811S7 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.75■■□□□ 1.07
Ubp1Q811S7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ubp1Q811S7 Gm14523-201ENSMUST00000117260 558 ntBASIC21.75■■□□□ 1.07
Ubp1Q811S7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.75■■□□□ 1.07
Ubp1Q811S7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.75■■□□□ 1.07
Ubp1Q811S7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ubp1Q811S7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms