Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Rif1Q6PR54 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.33■□□□□ 0.69
Rif1Q6PR54 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rif1Q6PR54 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rif1Q6PR54 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rif1Q6PR54 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rif1Q6PR54 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rif1Q6PR54 Gm44428-201ENSMUST00000204474 874 ntBASIC19.32■□□□□ 0.68
Rif1Q6PR54 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rif1Q6PR54 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rif1Q6PR54 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rif1Q6PR54 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.31■□□□□ 0.68
Rif1Q6PR54 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rif1Q6PR54 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.31■□□□□ 0.68
Rif1Q6PR54 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rif1Q6PR54 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rif1Q6PR54 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rif1Q6PR54 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rif1Q6PR54 Gm5874-201ENSMUST00000096101 508 ntBASIC19.31■□□□□ 0.68
Rif1Q6PR54 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rif1Q6PR54 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.3■□□□□ 0.68
Rif1Q6PR54 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Rif1Q6PR54 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rif1Q6PR54 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rif1Q6PR54 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rif1Q6PR54 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rif1Q6PR54 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rif1Q6PR54 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rif1Q6PR54 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rif1Q6PR54 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rif1Q6PR54 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rif1Q6PR54 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rif1Q6PR54 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.28■□□□□ 0.68
Rif1Q6PR54 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.28■□□□□ 0.68
Rif1Q6PR54 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rif1Q6PR54 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rif1Q6PR54 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.27■□□□□ 0.68
Rif1Q6PR54 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rif1Q6PR54 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rif1Q6PR54 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rif1Q6PR54 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rif1Q6PR54 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rif1Q6PR54 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.27■□□□□ 0.68
Rif1Q6PR54 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rif1Q6PR54 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rif1Q6PR54 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rif1Q6PR54 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rif1Q6PR54 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rif1Q6PR54 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rif1Q6PR54 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rif1Q6PR54 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rif1Q6PR54 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Rif1Q6PR54 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Rif1Q6PR54 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.24■□□□□ 0.67
Rif1Q6PR54 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rif1Q6PR54 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rif1Q6PR54 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rif1Q6PR54 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.24■□□□□ 0.67
Rif1Q6PR54 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rif1Q6PR54 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rif1Q6PR54 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rif1Q6PR54 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Rif1Q6PR54 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rif1Q6PR54 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rif1Q6PR54 Gm22238-201ENSMUST00000175222 88 ntBASIC19.23■□□□□ 0.67
Rif1Q6PR54 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rif1Q6PR54 Golgb1-201ENSMUST00000023534 498 ntBASIC19.23■□□□□ 0.67
Rif1Q6PR54 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rif1Q6PR54 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rif1Q6PR54 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rif1Q6PR54 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rif1Q6PR54 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.22■□□□□ 0.67
Rif1Q6PR54 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rif1Q6PR54 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rif1Q6PR54 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rif1Q6PR54 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rif1Q6PR54 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rif1Q6PR54 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.21■□□□□ 0.67
Rif1Q6PR54 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rif1Q6PR54 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rif1Q6PR54 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rif1Q6PR54 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rif1Q6PR54 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rif1Q6PR54 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rif1Q6PR54 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.21■□□□□ 0.66
Rif1Q6PR54 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rif1Q6PR54 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rif1Q6PR54 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.2■□□□□ 0.66
Rif1Q6PR54 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rif1Q6PR54 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rif1Q6PR54 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rif1Q6PR54 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rif1Q6PR54 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rif1Q6PR54 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rif1Q6PR54 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.19■□□□□ 0.66
Rif1Q6PR54 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rif1Q6PR54 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rif1Q6PR54 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rif1Q6PR54 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rif1Q6PR54 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms