Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.5■■□□□ 1.35
Scube3Q66PY1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.5■■□□□ 1.35
Scube3Q66PY1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Scube3Q66PY1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Scube3Q66PY1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Scube3Q66PY1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Scube3Q66PY1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Scube3Q66PY1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.49■■□□□ 1.35
Scube3Q66PY1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Scube3Q66PY1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Scube3Q66PY1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Scube3Q66PY1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.48■■□□□ 1.35
Scube3Q66PY1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Scube3Q66PY1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Scube3Q66PY1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Scube3Q66PY1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Scube3Q66PY1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Scube3Q66PY1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Scube3Q66PY1 Gm7332-201ENSMUST00000118351 454 ntBASIC23.46■■□□□ 1.35
Scube3Q66PY1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Scube3Q66PY1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Scube3Q66PY1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Scube3Q66PY1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.45■■□□□ 1.34
Scube3Q66PY1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scube3Q66PY1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scube3Q66PY1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.45■■□□□ 1.34
Scube3Q66PY1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scube3Q66PY1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Scube3Q66PY1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Scube3Q66PY1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Scube3Q66PY1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Scube3Q66PY1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.43■■□□□ 1.34
Scube3Q66PY1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.43■■□□□ 1.34
Scube3Q66PY1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.43■■□□□ 1.34
Scube3Q66PY1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Scube3Q66PY1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Scube3Q66PY1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Scube3Q66PY1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Scube3Q66PY1 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.42■■□□□ 1.34
Scube3Q66PY1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Scube3Q66PY1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.41■■□□□ 1.34
Scube3Q66PY1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scube3Q66PY1 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.41■■□□□ 1.34
Scube3Q66PY1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scube3Q66PY1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Scube3Q66PY1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scube3Q66PY1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scube3Q66PY1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scube3Q66PY1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Scube3Q66PY1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Scube3Q66PY1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Scube3Q66PY1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scube3Q66PY1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Scube3Q66PY1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scube3Q66PY1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
Scube3Q66PY1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Scube3Q66PY1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.39■■□□□ 1.33
Scube3Q66PY1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Scube3Q66PY1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.39■■□□□ 1.33
Scube3Q66PY1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scube3Q66PY1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Scube3Q66PY1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Scube3Q66PY1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
Scube3Q66PY1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Scube3Q66PY1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Scube3Q66PY1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Scube3Q66PY1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scube3Q66PY1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scube3Q66PY1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Scube3Q66PY1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scube3Q66PY1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Scube3Q66PY1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Scube3Q66PY1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.35■■□□□ 1.33
Scube3Q66PY1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Scube3Q66PY1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Scube3Q66PY1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Scube3Q66PY1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scube3Q66PY1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.34■■□□□ 1.33
Scube3Q66PY1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Scube3Q66PY1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Scube3Q66PY1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Scube3Q66PY1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Scube3Q66PY1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scube3Q66PY1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scube3Q66PY1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scube3Q66PY1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Scube3Q66PY1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scube3Q66PY1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scube3Q66PY1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scube3Q66PY1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
Scube3Q66PY1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.31■■□□□ 1.32
Scube3Q66PY1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scube3Q66PY1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Scube3Q66PY1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scube3Q66PY1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Scube3Q66PY1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scube3Q66PY1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Scube3Q66PY1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Scube3Q66PY1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scube3Q66PY1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms