Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Commd3Q63829 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Commd3Q63829 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Commd3Q63829 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Commd3Q63829 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Commd3Q63829 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Commd3Q63829 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Commd3Q63829 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.56■□□□□ 0.56
Commd3Q63829 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Commd3Q63829 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Commd3Q63829 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Commd3Q63829 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Commd3Q63829 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Commd3Q63829 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Commd3Q63829 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Commd3Q63829 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Commd3Q63829 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Commd3Q63829 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.54■□□□□ 0.56
Commd3Q63829 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.54■□□□□ 0.56
Commd3Q63829 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Commd3Q63829 Gm30023-201ENSMUST00000197970 889 ntBASIC18.53■□□□□ 0.56
Commd3Q63829 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.53■□□□□ 0.56
Commd3Q63829 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Commd3Q63829 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.53■□□□□ 0.56
Commd3Q63829 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Commd3Q63829 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Commd3Q63829 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Commd3Q63829 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Commd3Q63829 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Commd3Q63829 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Commd3Q63829 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Commd3Q63829 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Commd3Q63829 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Commd3Q63829 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.51■□□□□ 0.55
Commd3Q63829 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Commd3Q63829 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Commd3Q63829 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Commd3Q63829 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Commd3Q63829 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Commd3Q63829 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Commd3Q63829 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Commd3Q63829 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Commd3Q63829 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Commd3Q63829 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Commd3Q63829 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Commd3Q63829 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Commd3Q63829 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Commd3Q63829 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Commd3Q63829 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.49■□□□□ 0.55
Commd3Q63829 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Commd3Q63829 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.48■□□□□ 0.55
Commd3Q63829 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Commd3Q63829 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Commd3Q63829 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Commd3Q63829 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Commd3Q63829 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Commd3Q63829 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Commd3Q63829 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Commd3Q63829 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Commd3Q63829 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Commd3Q63829 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Commd3Q63829 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Commd3Q63829 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Commd3Q63829 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Commd3Q63829 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Commd3Q63829 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.45■□□□□ 0.54
Commd3Q63829 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.45■□□□□ 0.54
Commd3Q63829 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Commd3Q63829 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Commd3Q63829 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.45■□□□□ 0.54
Commd3Q63829 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.45■□□□□ 0.54
Commd3Q63829 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Commd3Q63829 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Commd3Q63829 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.44■□□□□ 0.54
Commd3Q63829 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Commd3Q63829 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Commd3Q63829 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Commd3Q63829 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Commd3Q63829 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Commd3Q63829 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Commd3Q63829 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Commd3Q63829 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Commd3Q63829 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Commd3Q63829 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Commd3Q63829 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Commd3Q63829 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Commd3Q63829 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Commd3Q63829 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.43■□□□□ 0.54
Commd3Q63829 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Commd3Q63829 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Commd3Q63829 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Commd3Q63829 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Commd3Q63829 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.42■□□□□ 0.54
Commd3Q63829 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Commd3Q63829 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Commd3Q63829 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Commd3Q63829 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Commd3Q63829 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Commd3Q63829 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Commd3Q63829 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms