Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Xrcc1Q60596 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Xrcc1Q60596 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Xrcc1Q60596 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Xrcc1Q60596 Gm14523-201ENSMUST00000117260 558 ntBASIC21.32■■□□□ 1
Xrcc1Q60596 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Xrcc1Q60596 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.32■■□□□ 1
Xrcc1Q60596 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Xrcc1Q60596 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Xrcc1Q60596 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.3■■□□□ 1
Xrcc1Q60596 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Xrcc1Q60596 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Xrcc1Q60596 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Xrcc1Q60596 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Xrcc1Q60596 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.29■■□□□ 1
Xrcc1Q60596 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Xrcc1Q60596 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Xrcc1Q60596 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.29■■□□□ 1
Xrcc1Q60596 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Xrcc1Q60596 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.29■■□□□ 1
Xrcc1Q60596 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Xrcc1Q60596 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Xrcc1Q60596 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.28■■□□□ 1
Xrcc1Q60596 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.28■■□□□ 1
Xrcc1Q60596 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.28■■□□□ 1
Xrcc1Q60596 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.28■■□□□ 1
Xrcc1Q60596 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Xrcc1Q60596 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Xrcc1Q60596 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Xrcc1Q60596 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Xrcc1Q60596 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Xrcc1Q60596 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Xrcc1Q60596 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Xrcc1Q60596 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Xrcc1Q60596 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.27■■□□□ 1
Xrcc1Q60596 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Xrcc1Q60596 Gm7332-201ENSMUST00000118351 454 ntBASIC21.26■□□□□ 0.99
Xrcc1Q60596 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.26■□□□□ 0.99
Xrcc1Q60596 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Xrcc1Q60596 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Xrcc1Q60596 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrcc1Q60596 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.25■□□□□ 0.99
Xrcc1Q60596 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrcc1Q60596 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.24■□□□□ 0.99
Xrcc1Q60596 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.24■□□□□ 0.99
Xrcc1Q60596 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Xrcc1Q60596 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrcc1Q60596 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrcc1Q60596 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrcc1Q60596 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.23■□□□□ 0.99
Xrcc1Q60596 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.23■□□□□ 0.99
Xrcc1Q60596 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrcc1Q60596 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.23■□□□□ 0.99
Xrcc1Q60596 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrcc1Q60596 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.22■□□□□ 0.99
Xrcc1Q60596 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Xrcc1Q60596 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.22■□□□□ 0.99
Xrcc1Q60596 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.22■□□□□ 0.99
Xrcc1Q60596 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Xrcc1Q60596 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Xrcc1Q60596 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrcc1Q60596 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Xrcc1Q60596 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrcc1Q60596 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrcc1Q60596 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Xrcc1Q60596 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Xrcc1Q60596 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrcc1Q60596 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Xrcc1Q60596 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Xrcc1Q60596 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Xrcc1Q60596 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Xrcc1Q60596 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Xrcc1Q60596 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrcc1Q60596 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Xrcc1Q60596 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrcc1Q60596 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Xrcc1Q60596 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Xrcc1Q60596 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.18■□□□□ 0.98
Xrcc1Q60596 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Xrcc1Q60596 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Xrcc1Q60596 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Xrcc1Q60596 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.16■□□□□ 0.98
Xrcc1Q60596 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Xrcc1Q60596 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Xrcc1Q60596 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Xrcc1Q60596 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Xrcc1Q60596 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Xrcc1Q60596 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Xrcc1Q60596 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Xrcc1Q60596 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Xrcc1Q60596 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Xrcc1Q60596 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Xrcc1Q60596 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Xrcc1Q60596 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.13■□□□□ 0.97
Xrcc1Q60596 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Xrcc1Q60596 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Xrcc1Q60596 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Xrcc1Q60596 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Xrcc1Q60596 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Xrcc1Q60596 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms