Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav8d-1Q5R1H8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav8d-1Q5R1H8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-1Q5R1H8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-1Q5R1H8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-1Q5R1H8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-1Q5R1H8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav8d-1Q5R1H8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav8d-1Q5R1H8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav8d-1Q5R1H8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-1Q5R1H8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav8d-1Q5R1H8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Trav8d-1Q5R1H8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.12■□□□□ 0.49
Trav8d-1Q5R1H8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-1Q5R1H8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-1Q5R1H8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-1Q5R1H8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.11■□□□□ 0.49
Trav8d-1Q5R1H8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.11■□□□□ 0.49
Trav8d-1Q5R1H8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-1Q5R1H8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav8d-1Q5R1H8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-1Q5R1H8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-1Q5R1H8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav8d-1Q5R1H8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-1Q5R1H8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-1Q5R1H8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav8d-1Q5R1H8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav8d-1Q5R1H8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-1Q5R1H8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Trav8d-1Q5R1H8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav8d-1Q5R1H8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-1Q5R1H8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav8d-1Q5R1H8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-1Q5R1H8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Trav8d-1Q5R1H8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-1Q5R1H8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav8d-1Q5R1H8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-1Q5R1H8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav8d-1Q5R1H8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.08■□□□□ 0.49
Trav8d-1Q5R1H8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav8d-1Q5R1H8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav8d-1Q5R1H8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.08■□□□□ 0.49
Trav8d-1Q5R1H8 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.08■□□□□ 0.49
Trav8d-1Q5R1H8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav8d-1Q5R1H8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav8d-1Q5R1H8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav8d-1Q5R1H8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Particl-201ENSMUST00000205370 1560 ntBASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav8d-1Q5R1H8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.06■□□□□ 0.48
Trav8d-1Q5R1H8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav8d-1Q5R1H8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8d-1Q5R1H8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8d-1Q5R1H8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8d-1Q5R1H8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8d-1Q5R1H8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav8d-1Q5R1H8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav8d-1Q5R1H8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8d-1Q5R1H8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8d-1Q5R1H8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8d-1Q5R1H8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8d-1Q5R1H8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8d-1Q5R1H8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8d-1Q5R1H8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8d-1Q5R1H8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8d-1Q5R1H8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8d-1Q5R1H8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8d-1Q5R1H8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav8d-1Q5R1H8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8d-1Q5R1H8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav8d-1Q5R1H8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trav8d-1Q5R1H8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav8d-1Q5R1H8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav8d-1Q5R1H8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav8d-1Q5R1H8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8d-1Q5R1H8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8d-1Q5R1H8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8d-1Q5R1H8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms