Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa3Q3UPR0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa3Q3UPR0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Shisa3Q3UPR0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.3■□□□□ 0.68
Shisa3Q3UPR0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa3Q3UPR0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa3Q3UPR0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa3Q3UPR0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa3Q3UPR0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa3Q3UPR0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa3Q3UPR0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa3Q3UPR0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Shisa3Q3UPR0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.28■□□□□ 0.68
Shisa3Q3UPR0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Shisa3Q3UPR0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.28■□□□□ 0.68
Shisa3Q3UPR0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Shisa3Q3UPR0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa3Q3UPR0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa3Q3UPR0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa3Q3UPR0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Shisa3Q3UPR0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa3Q3UPR0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa3Q3UPR0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa3Q3UPR0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa3Q3UPR0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa3Q3UPR0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.25■□□□□ 0.67
Shisa3Q3UPR0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Shisa3Q3UPR0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.25■□□□□ 0.67
Shisa3Q3UPR0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa3Q3UPR0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa3Q3UPR0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Shisa3Q3UPR0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Shisa3Q3UPR0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa3Q3UPR0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Shisa3Q3UPR0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa3Q3UPR0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa3Q3UPR0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa3Q3UPR0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa3Q3UPR0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.22■□□□□ 0.67
Shisa3Q3UPR0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa3Q3UPR0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa3Q3UPR0 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.22■□□□□ 0.67
Shisa3Q3UPR0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa3Q3UPR0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Shisa3Q3UPR0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa3Q3UPR0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Shisa3Q3UPR0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa3Q3UPR0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.21■□□□□ 0.67
Shisa3Q3UPR0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa3Q3UPR0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa3Q3UPR0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa3Q3UPR0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa3Q3UPR0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa3Q3UPR0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa3Q3UPR0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa3Q3UPR0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa3Q3UPR0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa3Q3UPR0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa3Q3UPR0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Shisa3Q3UPR0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shisa3Q3UPR0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Shisa3Q3UPR0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.19■□□□□ 0.66
Shisa3Q3UPR0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shisa3Q3UPR0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa3Q3UPR0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.18■□□□□ 0.66
Shisa3Q3UPR0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa3Q3UPR0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa3Q3UPR0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa3Q3UPR0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa3Q3UPR0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shisa3Q3UPR0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Shisa3Q3UPR0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Shisa3Q3UPR0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.17■□□□□ 0.66
Shisa3Q3UPR0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.17■□□□□ 0.66
Shisa3Q3UPR0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shisa3Q3UPR0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shisa3Q3UPR0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shisa3Q3UPR0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa3Q3UPR0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa3Q3UPR0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa3Q3UPR0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa3Q3UPR0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shisa3Q3UPR0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Shisa3Q3UPR0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Shisa3Q3UPR0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shisa3Q3UPR0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shisa3Q3UPR0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shisa3Q3UPR0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.14■□□□□ 0.66
Shisa3Q3UPR0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Shisa3Q3UPR0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shisa3Q3UPR0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Shisa3Q3UPR0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Shisa3Q3UPR0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.13■□□□□ 0.65
Shisa3Q3UPR0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shisa3Q3UPR0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shisa3Q3UPR0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shisa3Q3UPR0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shisa3Q3UPR0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Shisa3Q3UPR0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shisa3Q3UPR0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms