Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Gm5921-201ENSMUST00000075898 882 ntBASIC23.98■■□□□ 1.43
Smcr8Q3UMB5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smcr8Q3UMB5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Smcr8Q3UMB5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Smcr8Q3UMB5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smcr8Q3UMB5 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.94■■□□□ 1.42
Smcr8Q3UMB5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Smcr8Q3UMB5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smcr8Q3UMB5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Smcr8Q3UMB5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smcr8Q3UMB5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smcr8Q3UMB5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Smcr8Q3UMB5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smcr8Q3UMB5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smcr8Q3UMB5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Smcr8Q3UMB5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Smcr8Q3UMB5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smcr8Q3UMB5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Smcr8Q3UMB5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smcr8Q3UMB5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smcr8Q3UMB5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smcr8Q3UMB5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smcr8Q3UMB5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.89■■□□□ 1.41
Smcr8Q3UMB5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Smcr8Q3UMB5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smcr8Q3UMB5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smcr8Q3UMB5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smcr8Q3UMB5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smcr8Q3UMB5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smcr8Q3UMB5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smcr8Q3UMB5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smcr8Q3UMB5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smcr8Q3UMB5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Smcr8Q3UMB5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
Smcr8Q3UMB5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smcr8Q3UMB5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Smcr8Q3UMB5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smcr8Q3UMB5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smcr8Q3UMB5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Smcr8Q3UMB5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smcr8Q3UMB5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.84■■□□□ 1.41
Smcr8Q3UMB5 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.84■■□□□ 1.41
Smcr8Q3UMB5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
Smcr8Q3UMB5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Smcr8Q3UMB5 Gm5812-201ENSMUST00000061073 957 ntBASIC23.83■■□□□ 1.41
Smcr8Q3UMB5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Smcr8Q3UMB5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smcr8Q3UMB5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smcr8Q3UMB5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smcr8Q3UMB5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.82■■□□□ 1.4
Smcr8Q3UMB5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smcr8Q3UMB5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smcr8Q3UMB5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smcr8Q3UMB5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Smcr8Q3UMB5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Smcr8Q3UMB5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smcr8Q3UMB5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smcr8Q3UMB5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smcr8Q3UMB5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Smcr8Q3UMB5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.79■■□□□ 1.4
Smcr8Q3UMB5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smcr8Q3UMB5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Smcr8Q3UMB5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.77■■□□□ 1.4
Smcr8Q3UMB5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Smcr8Q3UMB5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smcr8Q3UMB5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Smcr8Q3UMB5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smcr8Q3UMB5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smcr8Q3UMB5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smcr8Q3UMB5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smcr8Q3UMB5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smcr8Q3UMB5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smcr8Q3UMB5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Smcr8Q3UMB5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 123.3 ms