Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smu1Q3UKJ7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Smu1Q3UKJ7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smu1Q3UKJ7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smu1Q3UKJ7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smu1Q3UKJ7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smu1Q3UKJ7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smu1Q3UKJ7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.33■■□□□ 1.01
Smu1Q3UKJ7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smu1Q3UKJ7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.33■■□□□ 1.01
Smu1Q3UKJ7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smu1Q3UKJ7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smu1Q3UKJ7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Smu1Q3UKJ7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Smu1Q3UKJ7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.32■■□□□ 1
Smu1Q3UKJ7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Smu1Q3UKJ7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.32■■□□□ 1
Smu1Q3UKJ7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.31■■□□□ 1
Smu1Q3UKJ7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smu1Q3UKJ7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.31■■□□□ 1
Smu1Q3UKJ7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Smu1Q3UKJ7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.3■■□□□ 1
Smu1Q3UKJ7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smu1Q3UKJ7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.3■■□□□ 1
Smu1Q3UKJ7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.3■■□□□ 1
Smu1Q3UKJ7 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.3■■□□□ 1
Smu1Q3UKJ7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smu1Q3UKJ7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smu1Q3UKJ7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smu1Q3UKJ7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Smu1Q3UKJ7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Smu1Q3UKJ7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.29■■□□□ 1
Smu1Q3UKJ7 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.29■■□□□ 1
Smu1Q3UKJ7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smu1Q3UKJ7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smu1Q3UKJ7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Smu1Q3UKJ7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smu1Q3UKJ7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smu1Q3UKJ7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.27■■□□□ 1
Smu1Q3UKJ7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.27■■□□□ 1
Smu1Q3UKJ7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smu1Q3UKJ7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Smu1Q3UKJ7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smu1Q3UKJ7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smu1Q3UKJ7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.26■□□□□ 0.99
Smu1Q3UKJ7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.26■□□□□ 0.99
Smu1Q3UKJ7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smu1Q3UKJ7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Smu1Q3UKJ7 Mir3960-201ENSMUST00000198213 73 ntBASIC21.26■□□□□ 0.99
Smu1Q3UKJ7 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.26■□□□□ 0.99
Smu1Q3UKJ7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smu1Q3UKJ7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smu1Q3UKJ7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.25■□□□□ 0.99
Smu1Q3UKJ7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smu1Q3UKJ7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smu1Q3UKJ7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.24■□□□□ 0.99
Smu1Q3UKJ7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smu1Q3UKJ7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.24■□□□□ 0.99
Smu1Q3UKJ7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smu1Q3UKJ7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smu1Q3UKJ7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smu1Q3UKJ7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smu1Q3UKJ7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smu1Q3UKJ7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.23■□□□□ 0.99
Smu1Q3UKJ7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.23■□□□□ 0.99
Smu1Q3UKJ7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smu1Q3UKJ7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Smu1Q3UKJ7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.22■□□□□ 0.99
Smu1Q3UKJ7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smu1Q3UKJ7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smu1Q3UKJ7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smu1Q3UKJ7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Smu1Q3UKJ7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smu1Q3UKJ7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smu1Q3UKJ7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smu1Q3UKJ7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.21■□□□□ 0.99
Smu1Q3UKJ7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.21■□□□□ 0.99
Smu1Q3UKJ7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smu1Q3UKJ7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smu1Q3UKJ7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Smu1Q3UKJ7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smu1Q3UKJ7 Gm7432-201ENSMUST00000210343 879 ntBASIC21.2■□□□□ 0.98
Smu1Q3UKJ7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smu1Q3UKJ7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smu1Q3UKJ7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smu1Q3UKJ7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Smu1Q3UKJ7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smu1Q3UKJ7 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.2■□□□□ 0.98
Smu1Q3UKJ7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms