Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.97■□□□□ 0.95
Treml4Q3LRV9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Treml4Q3LRV9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Treml4Q3LRV9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Treml4Q3LRV9 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.97■□□□□ 0.95
Treml4Q3LRV9 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.97■□□□□ 0.95
Treml4Q3LRV9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.97■□□□□ 0.95
Treml4Q3LRV9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Treml4Q3LRV9 Gm45444-201ENSMUST00000211394 898 ntBASIC20.97■□□□□ 0.95
Treml4Q3LRV9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Treml4Q3LRV9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Treml4Q3LRV9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.96■□□□□ 0.95
Treml4Q3LRV9 Gm45102-201ENSMUST00000207427 857 ntBASIC20.96■□□□□ 0.95
Treml4Q3LRV9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Treml4Q3LRV9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Treml4Q3LRV9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Treml4Q3LRV9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Treml4Q3LRV9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Treml4Q3LRV9 Gm15820-201ENSMUST00000201566 728 ntBASIC20.95■□□□□ 0.94
Treml4Q3LRV9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Treml4Q3LRV9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Treml4Q3LRV9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Treml4Q3LRV9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Treml4Q3LRV9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Treml4Q3LRV9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.93■□□□□ 0.94
Treml4Q3LRV9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.93■□□□□ 0.94
Treml4Q3LRV9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Treml4Q3LRV9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Treml4Q3LRV9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.93■□□□□ 0.94
Treml4Q3LRV9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Treml4Q3LRV9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Treml4Q3LRV9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Treml4Q3LRV9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Treml4Q3LRV9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Treml4Q3LRV9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Treml4Q3LRV9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Treml4Q3LRV9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.91■□□□□ 0.94
Treml4Q3LRV9 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.91■□□□□ 0.94
Treml4Q3LRV9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Treml4Q3LRV9 Gm13238-201ENSMUST00000117655 780 ntBASIC20.9■□□□□ 0.94
Treml4Q3LRV9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Treml4Q3LRV9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Treml4Q3LRV9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Treml4Q3LRV9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Treml4Q3LRV9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.89■□□□□ 0.94
Treml4Q3LRV9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Treml4Q3LRV9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Treml4Q3LRV9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Treml4Q3LRV9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Treml4Q3LRV9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Treml4Q3LRV9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Treml4Q3LRV9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.87■□□□□ 0.93
Treml4Q3LRV9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.87■□□□□ 0.93
Treml4Q3LRV9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Treml4Q3LRV9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Treml4Q3LRV9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Treml4Q3LRV9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Treml4Q3LRV9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Treml4Q3LRV9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Treml4Q3LRV9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Treml4Q3LRV9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Treml4Q3LRV9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Treml4Q3LRV9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Treml4Q3LRV9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Treml4Q3LRV9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Treml4Q3LRV9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
Treml4Q3LRV9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Treml4Q3LRV9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Treml4Q3LRV9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Treml4Q3LRV9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Treml4Q3LRV9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Treml4Q3LRV9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Treml4Q3LRV9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Treml4Q3LRV9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Treml4Q3LRV9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Treml4Q3LRV9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Treml4Q3LRV9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Treml4Q3LRV9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Treml4Q3LRV9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Treml4Q3LRV9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Treml4Q3LRV9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Treml4Q3LRV9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.84■□□□□ 0.93
Treml4Q3LRV9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Treml4Q3LRV9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Treml4Q3LRV9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Treml4Q3LRV9 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.83■□□□□ 0.93
Treml4Q3LRV9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.83■□□□□ 0.93
Treml4Q3LRV9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Treml4Q3LRV9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Treml4Q3LRV9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms