Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nhej1Q3KNJ2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Nhej1Q3KNJ2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nhej1Q3KNJ2 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.75■■□□□ 1.39
Nhej1Q3KNJ2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nhej1Q3KNJ2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.75■■□□□ 1.39
Nhej1Q3KNJ2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nhej1Q3KNJ2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Nhej1Q3KNJ2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Nhej1Q3KNJ2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nhej1Q3KNJ2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nhej1Q3KNJ2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nhej1Q3KNJ2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nhej1Q3KNJ2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.74■■□□□ 1.39
Nhej1Q3KNJ2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nhej1Q3KNJ2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nhej1Q3KNJ2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nhej1Q3KNJ2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nhej1Q3KNJ2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nhej1Q3KNJ2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.73■■□□□ 1.39
Nhej1Q3KNJ2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nhej1Q3KNJ2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nhej1Q3KNJ2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nhej1Q3KNJ2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nhej1Q3KNJ2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nhej1Q3KNJ2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Nhej1Q3KNJ2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Nhej1Q3KNJ2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Nhej1Q3KNJ2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nhej1Q3KNJ2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Nhej1Q3KNJ2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Nhej1Q3KNJ2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Nhej1Q3KNJ2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nhej1Q3KNJ2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.7■■□□□ 1.38
Nhej1Q3KNJ2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nhej1Q3KNJ2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nhej1Q3KNJ2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nhej1Q3KNJ2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nhej1Q3KNJ2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nhej1Q3KNJ2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.69■■□□□ 1.38
Nhej1Q3KNJ2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.69■■□□□ 1.38
Nhej1Q3KNJ2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Nhej1Q3KNJ2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Nhej1Q3KNJ2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Nhej1Q3KNJ2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.67■■□□□ 1.38
Nhej1Q3KNJ2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Nhej1Q3KNJ2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Nhej1Q3KNJ2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.67■■□□□ 1.38
Nhej1Q3KNJ2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
Nhej1Q3KNJ2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.67■■□□□ 1.38
Nhej1Q3KNJ2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.67■■□□□ 1.38
Nhej1Q3KNJ2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
Nhej1Q3KNJ2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.66■■□□□ 1.38
Nhej1Q3KNJ2 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.66■■□□□ 1.38
Nhej1Q3KNJ2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.66■■□□□ 1.38
Nhej1Q3KNJ2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Nhej1Q3KNJ2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nhej1Q3KNJ2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.66■■□□□ 1.38
Nhej1Q3KNJ2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.66■■□□□ 1.38
Nhej1Q3KNJ2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nhej1Q3KNJ2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Nhej1Q3KNJ2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Nhej1Q3KNJ2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nhej1Q3KNJ2 Gm4799-201ENSMUST00000095396 657 ntBASIC23.63■■□□□ 1.37
Nhej1Q3KNJ2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nhej1Q3KNJ2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nhej1Q3KNJ2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nhej1Q3KNJ2 Gm8503-201ENSMUST00000118131 455 ntBASIC23.62■■□□□ 1.37
Nhej1Q3KNJ2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Nhej1Q3KNJ2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nhej1Q3KNJ2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nhej1Q3KNJ2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Nhej1Q3KNJ2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Nhej1Q3KNJ2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Nhej1Q3KNJ2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Nhej1Q3KNJ2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Nhej1Q3KNJ2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Nhej1Q3KNJ2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Nhej1Q3KNJ2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Nhej1Q3KNJ2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nhej1Q3KNJ2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Nhej1Q3KNJ2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nhej1Q3KNJ2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Nhej1Q3KNJ2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Nhej1Q3KNJ2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Nhej1Q3KNJ2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.58■■□□□ 1.37
Nhej1Q3KNJ2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Nhej1Q3KNJ2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Nhej1Q3KNJ2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.58■■□□□ 1.36
Nhej1Q3KNJ2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.58■■□□□ 1.36
Nhej1Q3KNJ2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Nhej1Q3KNJ2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.57■■□□□ 1.36
Nhej1Q3KNJ2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Nhej1Q3KNJ2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.57■■□□□ 1.36
Nhej1Q3KNJ2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Nhej1Q3KNJ2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.57■■□□□ 1.36
Nhej1Q3KNJ2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Nhej1Q3KNJ2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Nhej1Q3KNJ2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.56■■□□□ 1.36
Nhej1Q3KNJ2 Gm9812-201ENSMUST00000061934 968 ntBASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms