Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.53■□□□□ 0.88
Col10a1Q05306 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col10a1Q05306 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col10a1Q05306 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.52■□□□□ 0.88
Col10a1Q05306 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col10a1Q05306 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Col10a1Q05306 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col10a1Q05306 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col10a1Q05306 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Col10a1Q05306 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col10a1Q05306 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col10a1Q05306 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.51■□□□□ 0.87
Col10a1Q05306 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.51■□□□□ 0.87
Col10a1Q05306 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col10a1Q05306 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col10a1Q05306 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col10a1Q05306 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.5■□□□□ 0.87
Col10a1Q05306 Gm44428-201ENSMUST00000204474 874 ntBASIC20.5■□□□□ 0.87
Col10a1Q05306 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col10a1Q05306 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.5■□□□□ 0.87
Col10a1Q05306 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col10a1Q05306 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col10a1Q05306 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col10a1Q05306 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col10a1Q05306 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.49■□□□□ 0.87
Col10a1Q05306 Gm27502-201ENSMUST00000183495 199 ntBASIC20.49■□□□□ 0.87
Col10a1Q05306 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col10a1Q05306 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Col10a1Q05306 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col10a1Q05306 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.48■□□□□ 0.87
Col10a1Q05306 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col10a1Q05306 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col10a1Q05306 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Col10a1Q05306 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col10a1Q05306 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col10a1Q05306 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col10a1Q05306 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Col10a1Q05306 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col10a1Q05306 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col10a1Q05306 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col10a1Q05306 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Col10a1Q05306 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Col10a1Q05306 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col10a1Q05306 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col10a1Q05306 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col10a1Q05306 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col10a1Q05306 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col10a1Q05306 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col10a1Q05306 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.44■□□□□ 0.86
Col10a1Q05306 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col10a1Q05306 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Col10a1Q05306 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col10a1Q05306 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col10a1Q05306 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col10a1Q05306 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col10a1Q05306 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col10a1Q05306 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col10a1Q05306 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.42■□□□□ 0.86
Col10a1Q05306 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.42■□□□□ 0.86
Col10a1Q05306 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Col10a1Q05306 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.42■□□□□ 0.86
Col10a1Q05306 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.42■□□□□ 0.86
Col10a1Q05306 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Col10a1Q05306 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col10a1Q05306 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col10a1Q05306 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col10a1Q05306 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.41■□□□□ 0.86
Col10a1Q05306 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.41■□□□□ 0.86
Col10a1Q05306 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.41■□□□□ 0.86
Col10a1Q05306 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Col10a1Q05306 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col10a1Q05306 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col10a1Q05306 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col10a1Q05306 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col10a1Q05306 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col10a1Q05306 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col10a1Q05306 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.39■□□□□ 0.85
Col10a1Q05306 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col10a1Q05306 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col10a1Q05306 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.39■□□□□ 0.85
Col10a1Q05306 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col10a1Q05306 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col10a1Q05306 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col10a1Q05306 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Col10a1Q05306 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col10a1Q05306 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.38■□□□□ 0.85
Col10a1Q05306 Gm12366-201ENSMUST00000121722 873 ntBASIC20.38■□□□□ 0.85
Col10a1Q05306 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.38■□□□□ 0.85
Col10a1Q05306 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.38■□□□□ 0.85
Col10a1Q05306 Gm5786-201ENSMUST00000085368 882 ntBASIC20.38■□□□□ 0.85
Col10a1Q05306 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col10a1Q05306 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col10a1Q05306 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.38■□□□□ 0.85
Col10a1Q05306 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Col10a1Q05306 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col10a1Q05306 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col10a1Q05306 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col10a1Q05306 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.37■□□□□ 0.85
Col10a1Q05306 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col10a1Q05306 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms