Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcaP82350 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SgcaP82350 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SgcaP82350 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SgcaP82350 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SgcaP82350 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcaP82350 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcaP82350 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcaP82350 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcaP82350 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcaP82350 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SgcaP82350 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SgcaP82350 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.59■□□□□ 0.57
SgcaP82350 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcaP82350 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcaP82350 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SgcaP82350 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SgcaP82350 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcaP82350 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SgcaP82350 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcaP82350 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcaP82350 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SgcaP82350 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SgcaP82350 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SgcaP82350 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SgcaP82350 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcaP82350 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcaP82350 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcaP82350 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SgcaP82350 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SgcaP82350 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.57■□□□□ 0.56
SgcaP82350 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SgcaP82350 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SgcaP82350 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcaP82350 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcaP82350 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcaP82350 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcaP82350 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcaP82350 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SgcaP82350 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.56■□□□□ 0.56
SgcaP82350 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
SgcaP82350 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SgcaP82350 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SgcaP82350 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcaP82350 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcaP82350 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SgcaP82350 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.55■□□□□ 0.56
SgcaP82350 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcaP82350 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SgcaP82350 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SgcaP82350 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.54■□□□□ 0.56
SgcaP82350 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcaP82350 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcaP82350 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SgcaP82350 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SgcaP82350 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SgcaP82350 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcaP82350 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcaP82350 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcaP82350 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SgcaP82350 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcaP82350 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcaP82350 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SgcaP82350 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SgcaP82350 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SgcaP82350 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SgcaP82350 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcaP82350 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcaP82350 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcaP82350 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.52■□□□□ 0.56
SgcaP82350 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SgcaP82350 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SgcaP82350 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SgcaP82350 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SgcaP82350 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SgcaP82350 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SgcaP82350 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcaP82350 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.51■□□□□ 0.55
SgcaP82350 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcaP82350 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SgcaP82350 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SgcaP82350 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcaP82350 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.5■□□□□ 0.55
SgcaP82350 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcaP82350 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SgcaP82350 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcaP82350 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.49■□□□□ 0.55
SgcaP82350 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SgcaP82350 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SgcaP82350 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcaP82350 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SgcaP82350 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcaP82350 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.48■□□□□ 0.55
SgcaP82350 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SgcaP82350 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SgcaP82350 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
SgcaP82350 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SgcaP82350 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcaP82350 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SgcaP82350 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms