Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim4P70271 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim4P70271 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim4P70271 Mir6538-201ENSMUST00000183713 110 ntBASIC18.42■□□□□ 0.54
Pdlim4P70271 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pdlim4P70271 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Pdlim4P70271 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim4P70271 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pdlim4P70271 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim4P70271 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pdlim4P70271 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.41■□□□□ 0.54
Pdlim4P70271 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim4P70271 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim4P70271 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pdlim4P70271 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim4P70271 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim4P70271 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pdlim4P70271 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pdlim4P70271 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim4P70271 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pdlim4P70271 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Pdlim4P70271 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim4P70271 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim4P70271 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim4P70271 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Pdlim4P70271 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.39■□□□□ 0.53
Pdlim4P70271 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Pdlim4P70271 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim4P70271 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim4P70271 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim4P70271 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim4P70271 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim4P70271 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim4P70271 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim4P70271 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim4P70271 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim4P70271 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim4P70271 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim4P70271 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim4P70271 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim4P70271 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim4P70271 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim4P70271 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pdlim4P70271 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim4P70271 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim4P70271 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.34■□□□□ 0.53
Pdlim4P70271 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.34■□□□□ 0.53
Pdlim4P70271 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim4P70271 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim4P70271 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pdlim4P70271 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim4P70271 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.33■□□□□ 0.52
Pdlim4P70271 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim4P70271 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Pdlim4P70271 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pdlim4P70271 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim4P70271 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim4P70271 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pdlim4P70271 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim4P70271 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim4P70271 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim4P70271 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pdlim4P70271 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.31■□□□□ 0.52
Pdlim4P70271 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pdlim4P70271 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.31■□□□□ 0.52
Pdlim4P70271 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim4P70271 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim4P70271 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim4P70271 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim4P70271 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.3■□□□□ 0.52
Pdlim4P70271 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim4P70271 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim4P70271 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.3■□□□□ 0.52
Pdlim4P70271 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pdlim4P70271 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pdlim4P70271 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim4P70271 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim4P70271 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim4P70271 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.29■□□□□ 0.52
Pdlim4P70271 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim4P70271 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim4P70271 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.29■□□□□ 0.52
Pdlim4P70271 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim4P70271 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim4P70271 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Pdlim4P70271 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim4P70271 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim4P70271 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim4P70271 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pdlim4P70271 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.28■□□□□ 0.52
Pdlim4P70271 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.28■□□□□ 0.52
Pdlim4P70271 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim4P70271 Gm44428-201ENSMUST00000204474 874 ntBASIC18.28■□□□□ 0.52
Pdlim4P70271 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim4P70271 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim4P70271 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.27■□□□□ 0.52
Pdlim4P70271 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim4P70271 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.27■□□□□ 0.52
Pdlim4P70271 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.27■□□□□ 0.52
Pdlim4P70271 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 172.4 ms