Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b6P59708 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b6P59708 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.87■□□□□ 0.77
Sf3b6P59708 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Sf3b6P59708 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b6P59708 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b6P59708 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b6P59708 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.86■□□□□ 0.77
Sf3b6P59708 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b6P59708 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b6P59708 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Sf3b6P59708 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b6P59708 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b6P59708 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b6P59708 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b6P59708 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.84■□□□□ 0.77
Sf3b6P59708 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b6P59708 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b6P59708 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b6P59708 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sf3b6P59708 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b6P59708 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3b6P59708 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Sf3b6P59708 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3b6P59708 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3b6P59708 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3b6P59708 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sf3b6P59708 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.83■□□□□ 0.76
Sf3b6P59708 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.82■□□□□ 0.76
Sf3b6P59708 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.82■□□□□ 0.76
Sf3b6P59708 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.81■□□□□ 0.76
Sf3b6P59708 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3b6P59708 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3b6P59708 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3b6P59708 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sf3b6P59708 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sf3b6P59708 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Sf3b6P59708 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.8■□□□□ 0.76
Sf3b6P59708 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3b6P59708 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b6P59708 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3b6P59708 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3b6P59708 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b6P59708 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b6P59708 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b6P59708 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.76■□□□□ 0.75
Sf3b6P59708 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b6P59708 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sf3b6P59708 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b6P59708 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b6P59708 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3b6P59708 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b6P59708 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.75■□□□□ 0.75
Sf3b6P59708 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b6P59708 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3b6P59708 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b6P59708 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b6P59708 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3b6P59708 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.73■□□□□ 0.75
Sf3b6P59708 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b6P59708 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sf3b6P59708 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b6P59708 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3b6P59708 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b6P59708 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b6P59708 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sf3b6P59708 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3b6P59708 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3b6P59708 Gm6821-201ENSMUST00000107540 542 ntBASIC19.71■□□□□ 0.75
Sf3b6P59708 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
Sf3b6P59708 Gm37136-201ENSMUST00000194368 194 ntBASIC19.71■□□□□ 0.75
Sf3b6P59708 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b6P59708 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Sf3b6P59708 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b6P59708 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sf3b6P59708 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b6P59708 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b6P59708 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sf3b6P59708 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b6P59708 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Sf3b6P59708 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.69■□□□□ 0.74
Sf3b6P59708 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3b6P59708 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b6P59708 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b6P59708 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b6P59708 Nkain2-201ENSMUST00000092602 558 ntBASIC19.68■□□□□ 0.74
Sf3b6P59708 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sf3b6P59708 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b6P59708 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b6P59708 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3b6P59708 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b6P59708 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b6P59708 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b6P59708 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b6P59708 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b6P59708 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b6P59708 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Sf3b6P59708 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b6P59708 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3b6P59708 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms