Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne2P59108 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne2P59108 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cpne2P59108 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne2P59108 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cpne2P59108 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cpne2P59108 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne2P59108 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne2P59108 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpne2P59108 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cpne2P59108 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne2P59108 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne2P59108 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne2P59108 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne2P59108 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne2P59108 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne2P59108 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpne2P59108 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpne2P59108 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.61■□□□□ 0.57
Cpne2P59108 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cpne2P59108 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Cpne2P59108 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpne2P59108 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne2P59108 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpne2P59108 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne2P59108 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne2P59108 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne2P59108 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne2P59108 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Cpne2P59108 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpne2P59108 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Cpne2P59108 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpne2P59108 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Cpne2P59108 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.58■□□□□ 0.56
Cpne2P59108 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne2P59108 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne2P59108 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cpne2P59108 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.58■□□□□ 0.56
Cpne2P59108 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cpne2P59108 Nkain2-201ENSMUST00000092602 558 ntBASIC18.57■□□□□ 0.56
Cpne2P59108 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cpne2P59108 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne2P59108 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne2P59108 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cpne2P59108 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne2P59108 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne2P59108 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne2P59108 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Cpne2P59108 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne2P59108 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cpne2P59108 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Cpne2P59108 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne2P59108 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cpne2P59108 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne2P59108 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne2P59108 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne2P59108 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.55■□□□□ 0.56
Cpne2P59108 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cpne2P59108 Notumos-201ENSMUST00000151998 2659 ntBASIC18.54■□□□□ 0.56
Cpne2P59108 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.54■□□□□ 0.56
Cpne2P59108 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne2P59108 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne2P59108 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne2P59108 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne2P59108 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne2P59108 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne2P59108 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.52■□□□□ 0.56
Cpne2P59108 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne2P59108 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne2P59108 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cpne2P59108 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Cpne2P59108 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne2P59108 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne2P59108 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cpne2P59108 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne2P59108 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.51■□□□□ 0.55
Cpne2P59108 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne2P59108 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne2P59108 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne2P59108 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne2P59108 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne2P59108 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cpne2P59108 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.5■□□□□ 0.55
Cpne2P59108 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.5■□□□□ 0.55
Cpne2P59108 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne2P59108 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.5■□□□□ 0.55
Cpne2P59108 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne2P59108 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Cpne2P59108 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne2P59108 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne2P59108 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne2P59108 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne2P59108 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cpne2P59108 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne2P59108 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cpne2P59108 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cpne2P59108 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne2P59108 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne2P59108 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cpne2P59108 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms