Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GdnfP48540 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.4■□□□□ 0.7
GdnfP48540 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GdnfP48540 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GdnfP48540 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GdnfP48540 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
GdnfP48540 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
GdnfP48540 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GdnfP48540 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GdnfP48540 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GdnfP48540 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GdnfP48540 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GdnfP48540 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GdnfP48540 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GdnfP48540 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GdnfP48540 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GdnfP48540 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GdnfP48540 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GdnfP48540 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GdnfP48540 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GdnfP48540 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GdnfP48540 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GdnfP48540 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GdnfP48540 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GdnfP48540 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GdnfP48540 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GdnfP48540 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GdnfP48540 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GdnfP48540 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GdnfP48540 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GdnfP48540 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GdnfP48540 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GdnfP48540 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GdnfP48540 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GdnfP48540 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GdnfP48540 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GdnfP48540 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
GdnfP48540 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.34■□□□□ 0.69
GdnfP48540 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GdnfP48540 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GdnfP48540 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GdnfP48540 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GdnfP48540 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
GdnfP48540 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GdnfP48540 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GdnfP48540 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GdnfP48540 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GdnfP48540 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GdnfP48540 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GdnfP48540 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GdnfP48540 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.32■□□□□ 0.68
GdnfP48540 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
GdnfP48540 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GdnfP48540 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GdnfP48540 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GdnfP48540 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
GdnfP48540 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GdnfP48540 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GdnfP48540 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GdnfP48540 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.31■□□□□ 0.68
GdnfP48540 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GdnfP48540 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GdnfP48540 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
GdnfP48540 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
GdnfP48540 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GdnfP48540 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GdnfP48540 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GdnfP48540 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.3■□□□□ 0.68
GdnfP48540 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.3■□□□□ 0.68
GdnfP48540 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GdnfP48540 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GdnfP48540 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GdnfP48540 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GdnfP48540 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
GdnfP48540 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GdnfP48540 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GdnfP48540 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GdnfP48540 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GdnfP48540 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GdnfP48540 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.27■□□□□ 0.68
GdnfP48540 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GdnfP48540 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GdnfP48540 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GdnfP48540 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GdnfP48540 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GdnfP48540 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.26■□□□□ 0.67
GdnfP48540 Gm37136-201ENSMUST00000194368 194 ntBASIC19.26■□□□□ 0.67
GdnfP48540 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.26■□□□□ 0.67
GdnfP48540 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GdnfP48540 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GdnfP48540 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GdnfP48540 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GdnfP48540 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
GdnfP48540 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GdnfP48540 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.25■□□□□ 0.67
GdnfP48540 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GdnfP48540 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GdnfP48540 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GdnfP48540 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GdnfP48540 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms