Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm16437-201ENSMUST00000025669 507 ntBASIC20.57■□□□□ 0.88
Nkx2-2P42586 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-2P42586 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-2P42586 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nkx2-2P42586 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-2P42586 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-2P42586 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-2P42586 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-2P42586 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nkx2-2P42586 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.55■□□□□ 0.88
Nkx2-2P42586 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-2P42586 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Nkx2-2P42586 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-2P42586 Gm11687-201ENSMUST00000118911 886 ntBASIC20.54■□□□□ 0.88
Nkx2-2P42586 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nkx2-2P42586 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-2P42586 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.52■□□□□ 0.88
Nkx2-2P42586 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nkx2-2P42586 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-2P42586 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-2P42586 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-2P42586 Gm44428-201ENSMUST00000204474 874 ntBASIC20.5■□□□□ 0.87
Nkx2-2P42586 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.5■□□□□ 0.87
Nkx2-2P42586 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-2P42586 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-2P42586 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-2P42586 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-2P42586 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-2P42586 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-2P42586 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Nkx2-2P42586 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-2P42586 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Nkx2-2P42586 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.48■□□□□ 0.87
Nkx2-2P42586 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.47■□□□□ 0.87
Nkx2-2P42586 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-2P42586 Gm11175-201ENSMUST00000116172 543 ntBASIC20.47■□□□□ 0.87
Nkx2-2P42586 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.47■□□□□ 0.87
Nkx2-2P42586 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-2P42586 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-2P42586 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-2P42586 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Nkx2-2P42586 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.47■□□□□ 0.87
Nkx2-2P42586 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-2P42586 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.46■□□□□ 0.87
Nkx2-2P42586 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-2P42586 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.45■□□□□ 0.86
Nkx2-2P42586 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Nkx2-2P42586 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-2P42586 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nkx2-2P42586 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nkx2-2P42586 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nkx2-2P42586 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nkx2-2P42586 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nkx2-2P42586 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.43■□□□□ 0.86
Nkx2-2P42586 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-2P42586 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-2P42586 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-2P42586 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-2P42586 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-2P42586 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-2P42586 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Nkx2-2P42586 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-2P42586 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-2P42586 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-2P42586 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.42■□□□□ 0.86
Nkx2-2P42586 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.42■□□□□ 0.86
Nkx2-2P42586 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-2P42586 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.42■□□□□ 0.86
Nkx2-2P42586 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nkx2-2P42586 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-2P42586 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-2P42586 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-2P42586 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-2P42586 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-2P42586 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.41■□□□□ 0.86
Nkx2-2P42586 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.41■□□□□ 0.86
Nkx2-2P42586 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nkx2-2P42586 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-2P42586 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-2P42586 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.4■□□□□ 0.86
Nkx2-2P42586 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nkx2-2P42586 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkx2-2P42586 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-2P42586 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-2P42586 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-2P42586 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-2P42586 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-2P42586 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-2P42586 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.37■□□□□ 0.85
Nkx2-2P42586 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nkx2-2P42586 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.37■□□□□ 0.85
Nkx2-2P42586 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms