Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cxcl12P40224 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cxcl12P40224 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.59■■□□□ 1.37
Cxcl12P40224 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Cxcl12P40224 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cxcl12P40224 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.58■■□□□ 1.37
Cxcl12P40224 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Cxcl12P40224 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cxcl12P40224 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cxcl12P40224 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Cxcl12P40224 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cxcl12P40224 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Cxcl12P40224 Gm13241-201ENSMUST00000094493 780 ntBASIC23.56■■□□□ 1.36
Cxcl12P40224 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Cxcl12P40224 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
Cxcl12P40224 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cxcl12P40224 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.55■■□□□ 1.36
Cxcl12P40224 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cxcl12P40224 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cxcl12P40224 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cxcl12P40224 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Cxcl12P40224 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cxcl12P40224 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.54■■□□□ 1.36
Cxcl12P40224 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.54■■□□□ 1.36
Cxcl12P40224 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.53■■□□□ 1.36
Cxcl12P40224 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.53■■□□□ 1.36
Cxcl12P40224 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.52■■□□□ 1.36
Cxcl12P40224 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Cxcl12P40224 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cxcl12P40224 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.52■■□□□ 1.36
Cxcl12P40224 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cxcl12P40224 Gm7417-201ENSMUST00000192950 473 ntBASIC23.51■■□□□ 1.35
Cxcl12P40224 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cxcl12P40224 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cxcl12P40224 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Cxcl12P40224 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cxcl12P40224 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.5■■□□□ 1.35
Cxcl12P40224 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.5■■□□□ 1.35
Cxcl12P40224 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.5■■□□□ 1.35
Cxcl12P40224 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cxcl12P40224 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cxcl12P40224 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cxcl12P40224 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.49■■□□□ 1.35
Cxcl12P40224 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Cxcl12P40224 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Cxcl12P40224 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cxcl12P40224 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Cxcl12P40224 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.47■■□□□ 1.35
Cxcl12P40224 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cxcl12P40224 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Cxcl12P40224 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Cxcl12P40224 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Cxcl12P40224 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Cxcl12P40224 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Cxcl12P40224 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Cxcl12P40224 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Cxcl12P40224 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cxcl12P40224 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.46■■□□□ 1.35
Cxcl12P40224 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cxcl12P40224 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Cxcl12P40224 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cxcl12P40224 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cxcl12P40224 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
Cxcl12P40224 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cxcl12P40224 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Cxcl12P40224 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Cxcl12P40224 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cxcl12P40224 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Cxcl12P40224 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cxcl12P40224 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cxcl12P40224 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cxcl12P40224 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cxcl12P40224 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cxcl12P40224 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cxcl12P40224 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Cxcl12P40224 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cxcl12P40224 Gm9847-201ENSMUST00000052528 599 ntBASIC23.42■■□□□ 1.34
Cxcl12P40224 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cxcl12P40224 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Cxcl12P40224 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.4■■□□□ 1.34
Cxcl12P40224 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cxcl12P40224 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cxcl12P40224 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cxcl12P40224 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Cxcl12P40224 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Cxcl12P40224 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Cxcl12P40224 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cxcl12P40224 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cxcl12P40224 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cxcl12P40224 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cxcl12P40224 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cxcl12P40224 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cxcl12P40224 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cxcl12P40224 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cxcl12P40224 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cxcl12P40224 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.36■■□□□ 1.33
Cxcl12P40224 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cxcl12P40224 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cxcl12P40224 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Cxcl12P40224 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms