Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk1P22518 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clk1P22518 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Clk1P22518 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.49■□□□□ 0.87
Clk1P22518 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk1P22518 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Clk1P22518 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clk1P22518 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk1P22518 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk1P22518 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.48■□□□□ 0.87
Clk1P22518 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk1P22518 Terc-201ENSMUST00000082862 423 ntBASIC20.48■□□□□ 0.87
Clk1P22518 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.48■□□□□ 0.87
Clk1P22518 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk1P22518 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clk1P22518 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clk1P22518 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.48■□□□□ 0.87
Clk1P22518 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clk1P22518 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clk1P22518 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.47■□□□□ 0.87
Clk1P22518 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Clk1P22518 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Clk1P22518 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Clk1P22518 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.46■□□□□ 0.87
Clk1P22518 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clk1P22518 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clk1P22518 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Clk1P22518 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clk1P22518 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.45■□□□□ 0.86
Clk1P22518 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.45■□□□□ 0.86
Clk1P22518 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clk1P22518 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clk1P22518 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clk1P22518 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clk1P22518 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clk1P22518 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clk1P22518 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.44■□□□□ 0.86
Clk1P22518 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.44■□□□□ 0.86
Clk1P22518 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clk1P22518 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clk1P22518 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clk1P22518 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clk1P22518 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.43■□□□□ 0.86
Clk1P22518 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clk1P22518 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clk1P22518 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clk1P22518 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Clk1P22518 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clk1P22518 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clk1P22518 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Clk1P22518 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clk1P22518 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clk1P22518 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clk1P22518 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.41■□□□□ 0.86
Clk1P22518 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Clk1P22518 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clk1P22518 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clk1P22518 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clk1P22518 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.41■□□□□ 0.86
Clk1P22518 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.4■□□□□ 0.86
Clk1P22518 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clk1P22518 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clk1P22518 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Clk1P22518 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clk1P22518 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clk1P22518 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clk1P22518 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clk1P22518 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clk1P22518 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clk1P22518 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.38■□□□□ 0.85
Clk1P22518 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clk1P22518 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clk1P22518 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clk1P22518 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.38■□□□□ 0.85
Clk1P22518 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.38■□□□□ 0.85
Clk1P22518 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Clk1P22518 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clk1P22518 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clk1P22518 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clk1P22518 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clk1P22518 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clk1P22518 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clk1P22518 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clk1P22518 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Clk1P22518 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clk1P22518 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk1P22518 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clk1P22518 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clk1P22518 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clk1P22518 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.35■□□□□ 0.85
Clk1P22518 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Clk1P22518 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.34■□□□□ 0.85
Clk1P22518 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clk1P22518 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clk1P22518 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clk1P22518 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clk1P22518 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.34■□□□□ 0.85
Clk1P22518 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clk1P22518 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clk1P22518 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms