Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fn1P11276 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Fn1P11276 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.87■□□□□ 0.45
Fn1P11276 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Fn1P11276 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fn1P11276 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Fn1P11276 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Fn1P11276 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fn1P11276 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.86■□□□□ 0.45
Fn1P11276 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.86■□□□□ 0.45
Fn1P11276 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fn1P11276 Gm8495-201ENSMUST00000188740 694 ntBASIC17.85■□□□□ 0.45
Fn1P11276 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fn1P11276 Gm12922-201ENSMUST00000120626 809 ntBASIC17.84■□□□□ 0.45
Fn1P11276 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.84■□□□□ 0.45
Fn1P11276 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fn1P11276 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Fn1P11276 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.83■□□□□ 0.45
Fn1P11276 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Fn1P11276 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Fn1P11276 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Fn1P11276 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Fn1P11276 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.83■□□□□ 0.44
Fn1P11276 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fn1P11276 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fn1P11276 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fn1P11276 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Fn1P11276 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Fn1P11276 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.82■□□□□ 0.44
Fn1P11276 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Fn1P11276 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.81■□□□□ 0.44
Fn1P11276 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Fn1P11276 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Fn1P11276 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fn1P11276 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fn1P11276 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fn1P11276 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fn1P11276 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fn1P11276 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Fn1P11276 Gm22238-201ENSMUST00000175222 88 ntBASIC17.79■□□□□ 0.44
Fn1P11276 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fn1P11276 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Fn1P11276 Gm12821-201ENSMUST00000120022 600 ntBASIC17.78■□□□□ 0.44
Fn1P11276 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Fn1P11276 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fn1P11276 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.77■□□□□ 0.44
Fn1P11276 Gm45417-201ENSMUST00000209533 758 ntBASIC17.77■□□□□ 0.44
Fn1P11276 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Fn1P11276 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fn1P11276 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Fn1P11276 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Fn1P11276 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.77■□□□□ 0.43
Fn1P11276 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.77■□□□□ 0.43
Fn1P11276 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Fn1P11276 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Fn1P11276 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.76■□□□□ 0.43
Fn1P11276 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.76■□□□□ 0.43
Fn1P11276 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fn1P11276 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Fn1P11276 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Fn1P11276 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Fn1P11276 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.76■□□□□ 0.43
Fn1P11276 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Fn1P11276 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Fn1P11276 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Fn1P11276 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.75■□□□□ 0.43
Fn1P11276 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.75■□□□□ 0.43
Fn1P11276 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Fn1P11276 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fn1P11276 Gm18284-201ENSMUST00000172604 624 ntBASIC17.74■□□□□ 0.43
Fn1P11276 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.74■□□□□ 0.43
Fn1P11276 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.74■□□□□ 0.43
Fn1P11276 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Fn1P11276 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fn1P11276 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fn1P11276 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.74■□□□□ 0.43
Fn1P11276 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Fn1P11276 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Fn1P11276 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fn1P11276 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Fn1P11276 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.73■□□□□ 0.43
Fn1P11276 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Fn1P11276 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
Fn1P11276 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Fn1P11276 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Fn1P11276 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.71■□□□□ 0.43
Fn1P11276 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.71■□□□□ 0.43
Fn1P11276 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Fn1P11276 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Fn1P11276 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.71■□□□□ 0.42
Fn1P11276 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Fn1P11276 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Fn1P11276 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.7■□□□□ 0.42
Fn1P11276 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Fn1P11276 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms