Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccl3P10855 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccl3P10855 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccl3P10855 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.05■□□□□ 0.8
Ccl3P10855 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccl3P10855 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccl3P10855 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccl3P10855 Gm14117-201ENSMUST00000122417 843 ntBASIC20.04■□□□□ 0.8
Ccl3P10855 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.04■□□□□ 0.8
Ccl3P10855 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccl3P10855 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccl3P10855 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccl3P10855 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccl3P10855 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccl3P10855 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccl3P10855 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ccl3P10855 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl3P10855 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl3P10855 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccl3P10855 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl3P10855 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl3P10855 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccl3P10855 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl3P10855 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl3P10855 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccl3P10855 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccl3P10855 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.01■□□□□ 0.79
Ccl3P10855 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccl3P10855 Fezf2-202ENSMUST00000224023 1917 ntBASIC20■□□□□ 0.79
Ccl3P10855 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccl3P10855 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Ccl3P10855 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccl3P10855 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccl3P10855 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccl3P10855 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccl3P10855 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccl3P10855 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccl3P10855 Gm9959-201ENSMUST00000068277 390 ntBASIC19.99■□□□□ 0.79
Ccl3P10855 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.99■□□□□ 0.79
Ccl3P10855 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccl3P10855 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccl3P10855 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccl3P10855 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ccl3P10855 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ccl3P10855 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccl3P10855 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccl3P10855 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccl3P10855 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.97■□□□□ 0.79
Ccl3P10855 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccl3P10855 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccl3P10855 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.96■□□□□ 0.79
Ccl3P10855 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccl3P10855 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ccl3P10855 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccl3P10855 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.96■□□□□ 0.79
Ccl3P10855 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccl3P10855 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
Ccl3P10855 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccl3P10855 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.95■□□□□ 0.78
Ccl3P10855 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccl3P10855 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccl3P10855 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccl3P10855 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccl3P10855 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccl3P10855 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccl3P10855 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccl3P10855 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccl3P10855 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ccl3P10855 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ccl3P10855 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccl3P10855 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ccl3P10855 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccl3P10855 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccl3P10855 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccl3P10855 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.92■□□□□ 0.78
Ccl3P10855 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccl3P10855 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccl3P10855 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccl3P10855 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.92■□□□□ 0.78
Ccl3P10855 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccl3P10855 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccl3P10855 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.91■□□□□ 0.78
Ccl3P10855 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccl3P10855 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccl3P10855 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccl3P10855 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccl3P10855 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccl3P10855 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccl3P10855 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccl3P10855 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccl3P10855 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.89■□□□□ 0.77
Ccl3P10855 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccl3P10855 Gm10232-201ENSMUST00000089221 720 ntBASIC19.89■□□□□ 0.77
Ccl3P10855 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccl3P10855 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.88■□□□□ 0.77
Ccl3P10855 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccl3P10855 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccl3P10855 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccl3P10855 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.88■□□□□ 0.77
Ccl3P10855 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms