Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PrnpP04925 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.51■■□□□ 1.35
PrnpP04925 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
PrnpP04925 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PrnpP04925 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PrnpP04925 Gm15039-201ENSMUST00000118914 875 ntBASIC23.5■■□□□ 1.35
PrnpP04925 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PrnpP04925 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PrnpP04925 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PrnpP04925 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PrnpP04925 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.49■■□□□ 1.35
PrnpP04925 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.49■■□□□ 1.35
PrnpP04925 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PrnpP04925 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PrnpP04925 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.48■■□□□ 1.35
PrnpP04925 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
PrnpP04925 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PrnpP04925 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PrnpP04925 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PrnpP04925 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PrnpP04925 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
PrnpP04925 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PrnpP04925 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PrnpP04925 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
PrnpP04925 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PrnpP04925 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PrnpP04925 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.47■■□□□ 1.35
PrnpP04925 Gm45102-201ENSMUST00000207427 857 ntBASIC23.46■■□□□ 1.35
PrnpP04925 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PrnpP04925 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
PrnpP04925 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.46■■□□□ 1.35
PrnpP04925 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PrnpP04925 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PrnpP04925 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PrnpP04925 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PrnpP04925 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.45■■□□□ 1.34
PrnpP04925 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PrnpP04925 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
PrnpP04925 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.44■■□□□ 1.34
PrnpP04925 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PrnpP04925 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
PrnpP04925 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PrnpP04925 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
PrnpP04925 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PrnpP04925 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PrnpP04925 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.42■■□□□ 1.34
PrnpP04925 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.42■■□□□ 1.34
PrnpP04925 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
PrnpP04925 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.42■■□□□ 1.34
PrnpP04925 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
PrnpP04925 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PrnpP04925 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PrnpP04925 Gm7199-201ENSMUST00000118327 1485 ntBASIC23.41■■□□□ 1.34
PrnpP04925 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PrnpP04925 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PrnpP04925 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.41■■□□□ 1.34
PrnpP04925 Gm14117-201ENSMUST00000122417 843 ntBASIC23.4■■□□□ 1.34
PrnpP04925 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.4■■□□□ 1.34
PrnpP04925 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.4■■□□□ 1.34
PrnpP04925 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PrnpP04925 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PrnpP04925 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PrnpP04925 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PrnpP04925 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PrnpP04925 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PrnpP04925 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PrnpP04925 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PrnpP04925 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
PrnpP04925 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PrnpP04925 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PrnpP04925 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PrnpP04925 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PrnpP04925 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PrnpP04925 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PrnpP04925 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PrnpP04925 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PrnpP04925 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.36■■□□□ 1.33
PrnpP04925 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PrnpP04925 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PrnpP04925 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PrnpP04925 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PrnpP04925 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PrnpP04925 Gm9959-201ENSMUST00000068277 390 ntBASIC23.35■■□□□ 1.33
PrnpP04925 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.35■■□□□ 1.33
PrnpP04925 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PrnpP04925 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PrnpP04925 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PrnpP04925 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
PrnpP04925 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PrnpP04925 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PrnpP04925 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
PrnpP04925 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.33■■□□□ 1.33
PrnpP04925 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PrnpP04925 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PrnpP04925 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PrnpP04925 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.31■■□□□ 1.32
PrnpP04925 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.31■■□□□ 1.32
PrnpP04925 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PrnpP04925 Gm10232-201ENSMUST00000089221 720 ntBASIC23.31■■□□□ 1.32
PrnpP04925 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms