Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
P01852 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.31■□□□□ 0.84
P01852 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.31■□□□□ 0.84
P01852 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
P01852 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.3■□□□□ 0.84
P01852 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P01852 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
P01852 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01852 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.29■□□□□ 0.84
P01852 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.29■□□□□ 0.84
P01852 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01852 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
P01852 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
P01852 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P01852 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01852 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01852 Cap2-205ENSMUST00000225824 1634 ntBASIC20.28■□□□□ 0.84
P01852 Gm44428-201ENSMUST00000204474 874 ntBASIC20.28■□□□□ 0.84
P01852 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01852 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01852 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P01852 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
P01852 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
P01852 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.27■□□□□ 0.84
P01852 Gm12366-201ENSMUST00000121722 873 ntBASIC20.27■□□□□ 0.84
P01852 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.27■□□□□ 0.84
P01852 Gm27502-201ENSMUST00000183495 199 ntBASIC20.27■□□□□ 0.84
P01852 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.27■□□□□ 0.84
P01852 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
P01852 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
P01852 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.27■□□□□ 0.84
P01852 Gm5786-201ENSMUST00000085368 882 ntBASIC20.27■□□□□ 0.84
P01852 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
P01852 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.26■□□□□ 0.83
P01852 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P01852 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
P01852 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01852 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.25■□□□□ 0.83
P01852 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P01852 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P01852 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P01852 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.25■□□□□ 0.83
P01852 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
P01852 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P01852 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P01852 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.24■□□□□ 0.83
P01852 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P01852 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
P01852 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.24■□□□□ 0.83
P01852 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.24■□□□□ 0.83
P01852 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
P01852 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
P01852 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P01852 Gm14523-201ENSMUST00000117260 558 ntBASIC20.23■□□□□ 0.83
P01852 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
P01852 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P01852 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P01852 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P01852 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01852 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
P01852 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P01852 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P01852 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01852 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.2■□□□□ 0.82
P01852 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
P01852 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
P01852 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
P01852 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P01852 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Gm7332-201ENSMUST00000118351 454 ntBASIC20.19■□□□□ 0.82
P01852 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.19■□□□□ 0.82
P01852 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.19■□□□□ 0.82
P01852 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01852 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01852 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01852 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
P01852 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01852 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.17■□□□□ 0.82
P01852 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.16■□□□□ 0.82
P01852 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01852 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P01852 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P01852 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
P01852 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.15■□□□□ 0.82
P01852 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01852 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01852 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P01852 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.14■□□□□ 0.81
P01852 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
P01852 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.14■□□□□ 0.81
P01852 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms