Protein–RNA interactions for Protein: O70576

Stag3, Cohesin subunit SA-3, mousemouse

Predictions only

Length 1,240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag3O70576 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Stag3O70576 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Stag3O70576 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Stag3O70576 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Stag3O70576 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Stag3O70576 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC31.06■■■□□ 2.56
Stag3O70576 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Stag3O70576 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Stag3O70576 Gm45444-201ENSMUST00000211394 898 ntBASIC31.05■■■□□ 2.56
Stag3O70576 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC31.05■■■□□ 2.56
Stag3O70576 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
Stag3O70576 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Stag3O70576 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
Stag3O70576 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Stag3O70576 Gm22567-201ENSMUST00000175542 342 ntBASIC31.03■■■□□ 2.56
Stag3O70576 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Stag3O70576 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Stag3O70576 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC31.02■■■□□ 2.56
Stag3O70576 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Stag3O70576 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Stag3O70576 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC31.01■■■□□ 2.55
Stag3O70576 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Stag3O70576 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Stag3O70576 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Stag3O70576 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Stag3O70576 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Stag3O70576 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Stag3O70576 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Stag3O70576 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Stag3O70576 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
Stag3O70576 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC30.97■■■□□ 2.55
Stag3O70576 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Stag3O70576 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Stag3O70576 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Stag3O70576 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC30.96■■■□□ 2.55
Stag3O70576 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Stag3O70576 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Stag3O70576 Gm15820-201ENSMUST00000201566 728 ntBASIC30.96■■■□□ 2.55
Stag3O70576 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Stag3O70576 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC30.96■■■□□ 2.55
Stag3O70576 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Stag3O70576 Gm7199-201ENSMUST00000118327 1485 ntBASIC30.95■■■□□ 2.55
Stag3O70576 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
Stag3O70576 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC30.95■■■□□ 2.55
Stag3O70576 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC30.95■■■□□ 2.55
Stag3O70576 AC093043.1-201ENSMUST00000226700 898 ntBASIC30.95■■■□□ 2.55
Stag3O70576 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC30.95■■■□□ 2.54
Stag3O70576 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Stag3O70576 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Stag3O70576 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
Stag3O70576 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Stag3O70576 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Stag3O70576 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Stag3O70576 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
Stag3O70576 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Stag3O70576 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC30.93■■■□□ 2.54
Stag3O70576 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC30.93■■■□□ 2.54
Stag3O70576 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Stag3O70576 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Stag3O70576 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Stag3O70576 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
Stag3O70576 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
Stag3O70576 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
Stag3O70576 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
Stag3O70576 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Stag3O70576 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Stag3O70576 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Stag3O70576 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Stag3O70576 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Stag3O70576 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Stag3O70576 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.53
Stag3O70576 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Stag3O70576 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC30.88■■■□□ 2.53
Stag3O70576 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Stag3O70576 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Stag3O70576 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Stag3O70576 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Stag3O70576 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Stag3O70576 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Stag3O70576 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
Stag3O70576 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC30.86■■■□□ 2.53
Stag3O70576 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC30.86■■■□□ 2.53
Stag3O70576 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC30.86■■■□□ 2.53
Stag3O70576 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Stag3O70576 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Stag3O70576 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Stag3O70576 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Stag3O70576 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Stag3O70576 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Stag3O70576 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Stag3O70576 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Stag3O70576 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Stag3O70576 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
Stag3O70576 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Stag3O70576 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Stag3O70576 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Stag3O70576 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Stag3O70576 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.81■■■□□ 2.52
Stag3O70576 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC30.81■■■□□ 2.52
Stag3O70576 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms