Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■■□□ 2
Mmp8O70138 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Mmp8O70138 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Mmp8O70138 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Mmp8O70138 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Mmp8O70138 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.49■■□□□ 1.99
Mmp8O70138 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Mmp8O70138 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Mmp8O70138 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Mmp8O70138 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Mmp8O70138 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Mmp8O70138 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Mmp8O70138 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Mmp8O70138 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Mmp8O70138 Gm27502-201ENSMUST00000183495 199 ntBASIC27.47■■□□□ 1.99
Mmp8O70138 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Mmp8O70138 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.46■■□□□ 1.99
Mmp8O70138 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Mmp8O70138 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Mmp8O70138 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC27.46■■□□□ 1.99
Mmp8O70138 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Mmp8O70138 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC27.45■■□□□ 1.99
Mmp8O70138 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
Mmp8O70138 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Mmp8O70138 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC27.44■■□□□ 1.98
Mmp8O70138 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Mmp8O70138 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Mmp8O70138 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Mmp8O70138 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Mmp8O70138 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC27.42■■□□□ 1.98
Mmp8O70138 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Mmp8O70138 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Mmp8O70138 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Mmp8O70138 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Mmp8O70138 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Mmp8O70138 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Mmp8O70138 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Mmp8O70138 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Mmp8O70138 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC27.41■■□□□ 1.98
Mmp8O70138 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Mmp8O70138 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Mmp8O70138 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.4■■□□□ 1.98
Mmp8O70138 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Mmp8O70138 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Mmp8O70138 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Mmp8O70138 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.39■■□□□ 1.98
Mmp8O70138 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Mmp8O70138 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Mmp8O70138 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Mmp8O70138 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Mmp8O70138 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
Mmp8O70138 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Mmp8O70138 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Mmp8O70138 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Mmp8O70138 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Mmp8O70138 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Mmp8O70138 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Mmp8O70138 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Mmp8O70138 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Mmp8O70138 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Mmp8O70138 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.36■■□□□ 1.97
Mmp8O70138 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Mmp8O70138 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Mmp8O70138 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Mmp8O70138 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Mmp8O70138 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Mmp8O70138 Gm14523-201ENSMUST00000117260 558 ntBASIC27.35■■□□□ 1.97
Mmp8O70138 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Mmp8O70138 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Mmp8O70138 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Mmp8O70138 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Mmp8O70138 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Mmp8O70138 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Mmp8O70138 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Mmp8O70138 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.34■■□□□ 1.97
Mmp8O70138 Gm12366-201ENSMUST00000121722 873 ntBASIC27.34■■□□□ 1.97
Mmp8O70138 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.34■■□□□ 1.97
Mmp8O70138 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Mmp8O70138 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.34■■□□□ 1.97
Mmp8O70138 Gm5786-201ENSMUST00000085368 882 ntBASIC27.34■■□□□ 1.97
Mmp8O70138 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Mmp8O70138 Gm6934-201ENSMUST00000194780 1905 ntBASIC27.33■■□□□ 1.97
Mmp8O70138 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Mmp8O70138 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Mmp8O70138 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Mmp8O70138 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.32■■□□□ 1.96
Mmp8O70138 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Mmp8O70138 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Mmp8O70138 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Mmp8O70138 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Mmp8O70138 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.31■■□□□ 1.96
Mmp8O70138 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Mmp8O70138 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.3■■□□□ 1.96
Mmp8O70138 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Mmp8O70138 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
Mmp8O70138 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Mmp8O70138 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Mmp8O70138 AC117769.4-201ENSMUST00000225679 685 ntBASIC27.29■■□□□ 1.96
Mmp8O70138 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Mmp8O70138 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms