Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Smarce1O54941 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
Smarce1O54941 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.45■■□□□ 1.82
Smarce1O54941 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.44■■□□□ 1.82
Smarce1O54941 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smarce1O54941 Gm4799-201ENSMUST00000095396 657 ntBASIC26.44■■□□□ 1.82
Smarce1O54941 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smarce1O54941 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smarce1O54941 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Smarce1O54941 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Smarce1O54941 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Smarce1O54941 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.43■■□□□ 1.82
Smarce1O54941 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Smarce1O54941 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Smarce1O54941 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
Smarce1O54941 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Smarce1O54941 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Smarce1O54941 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Smarce1O54941 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Smarce1O54941 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Smarce1O54941 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.41■■□□□ 1.82
Smarce1O54941 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Smarce1O54941 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.41■■□□□ 1.82
Smarce1O54941 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Smarce1O54941 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Smarce1O54941 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.4■■□□□ 1.82
Smarce1O54941 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Smarce1O54941 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smarce1O54941 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smarce1O54941 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Smarce1O54941 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.39■■□□□ 1.82
Smarce1O54941 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Smarce1O54941 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smarce1O54941 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Smarce1O54941 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Smarce1O54941 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Smarce1O54941 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Smarce1O54941 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Smarce1O54941 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smarce1O54941 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.36■■□□□ 1.81
Smarce1O54941 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smarce1O54941 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Smarce1O54941 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC26.36■■□□□ 1.81
Smarce1O54941 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smarce1O54941 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Smarce1O54941 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smarce1O54941 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smarce1O54941 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.35■■□□□ 1.81
Smarce1O54941 Gm9812-201ENSMUST00000061934 968 ntBASIC26.35■■□□□ 1.81
Smarce1O54941 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smarce1O54941 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smarce1O54941 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Smarce1O54941 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Smarce1O54941 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Smarce1O54941 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Smarce1O54941 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Smarce1O54941 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Smarce1O54941 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.33■■□□□ 1.81
Smarce1O54941 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Smarce1O54941 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Smarce1O54941 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Smarce1O54941 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Smarce1O54941 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Smarce1O54941 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smarce1O54941 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.32■■□□□ 1.8
Smarce1O54941 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smarce1O54941 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Smarce1O54941 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Smarce1O54941 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smarce1O54941 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smarce1O54941 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Smarce1O54941 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Smarce1O54941 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.29■■□□□ 1.8
Smarce1O54941 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smarce1O54941 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.29■■□□□ 1.8
Smarce1O54941 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.29■■□□□ 1.8
Smarce1O54941 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.29■■□□□ 1.8
Smarce1O54941 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC26.29■■□□□ 1.8
Smarce1O54941 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Smarce1O54941 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smarce1O54941 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Smarce1O54941 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.28■■□□□ 1.8
Smarce1O54941 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smarce1O54941 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smarce1O54941 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smarce1O54941 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Smarce1O54941 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Smarce1O54941 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.28■■□□□ 1.8
Smarce1O54941 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smarce1O54941 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smarce1O54941 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smarce1O54941 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Smarce1O54941 Mir3960-201ENSMUST00000198213 73 ntBASIC26.27■■□□□ 1.8
Smarce1O54941 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Smarce1O54941 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smarce1O54941 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Smarce1O54941 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.26■■□□□ 1.79
Smarce1O54941 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Smarce1O54941 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smarce1O54941 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms