Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccr6O54689 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccr6O54689 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccr6O54689 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccr6O54689 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccr6O54689 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccr6O54689 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccr6O54689 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccr6O54689 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccr6O54689 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.82■□□□□ 0.6
Ccr6O54689 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccr6O54689 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr6O54689 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr6O54689 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccr6O54689 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.81■□□□□ 0.6
Ccr6O54689 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccr6O54689 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccr6O54689 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccr6O54689 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccr6O54689 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ccr6O54689 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccr6O54689 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccr6O54689 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccr6O54689 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccr6O54689 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccr6O54689 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccr6O54689 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccr6O54689 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccr6O54689 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccr6O54689 Gm24804-201ENSMUST00000174982 85 ntBASIC18.78■□□□□ 0.6
Ccr6O54689 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccr6O54689 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccr6O54689 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ccr6O54689 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccr6O54689 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccr6O54689 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ccr6O54689 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccr6O54689 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccr6O54689 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ccr6O54689 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccr6O54689 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccr6O54689 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccr6O54689 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccr6O54689 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccr6O54689 Notumos-201ENSMUST00000151998 2659 ntBASIC18.76■□□□□ 0.59
Ccr6O54689 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccr6O54689 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccr6O54689 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccr6O54689 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccr6O54689 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Ccr6O54689 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccr6O54689 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccr6O54689 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Ccr6O54689 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccr6O54689 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Ccr6O54689 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccr6O54689 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ccr6O54689 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ccr6O54689 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.72■□□□□ 0.59
Ccr6O54689 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.72■□□□□ 0.59
Ccr6O54689 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ccr6O54689 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.72■□□□□ 0.59
Ccr6O54689 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ccr6O54689 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Ccr6O54689 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccr6O54689 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccr6O54689 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.71■□□□□ 0.59
Ccr6O54689 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.71■□□□□ 0.59
Ccr6O54689 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccr6O54689 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Ccr6O54689 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccr6O54689 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Ccr6O54689 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ccr6O54689 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccr6O54689 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.7■□□□□ 0.58
Ccr6O54689 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr6O54689 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Ccr6O54689 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr6O54689 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr6O54689 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ccr6O54689 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr6O54689 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr6O54689 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccr6O54689 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr6O54689 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr6O54689 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Ccr6O54689 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr6O54689 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr6O54689 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccr6O54689 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Ccr6O54689 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccr6O54689 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr6O54689 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr6O54689 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccr6O54689 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccr6O54689 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr6O54689 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr6O54689 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccr6O54689 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccr6O54689 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms