Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Abca4O35600 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Abca4O35600 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Abca4O35600 Gm12821-201ENSMUST00000120022 600 ntBASIC21.82■■□□□ 1.08
Abca4O35600 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.82■■□□□ 1.08
Abca4O35600 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Abca4O35600 Gm45417-201ENSMUST00000209533 758 ntBASIC21.82■■□□□ 1.08
Abca4O35600 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Abca4O35600 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Abca4O35600 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Abca4O35600 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.81■■□□□ 1.08
Abca4O35600 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Abca4O35600 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.81■■□□□ 1.08
Abca4O35600 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Abca4O35600 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Abca4O35600 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.81■■□□□ 1.08
Abca4O35600 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Abca4O35600 Gm18284-201ENSMUST00000172604 624 ntBASIC21.8■■□□□ 1.08
Abca4O35600 Gm8495-201ENSMUST00000188740 694 ntBASIC21.8■■□□□ 1.08
Abca4O35600 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.8■■□□□ 1.08
Abca4O35600 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.8■■□□□ 1.08
Abca4O35600 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Abca4O35600 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.79■■□□□ 1.08
Abca4O35600 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Abca4O35600 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Abca4O35600 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Abca4O35600 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.78■■□□□ 1.08
Abca4O35600 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Abca4O35600 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.78■■□□□ 1.08
Abca4O35600 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Abca4O35600 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.78■■□□□ 1.08
Abca4O35600 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Abca4O35600 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abca4O35600 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.75■■□□□ 1.07
Abca4O35600 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Abca4O35600 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.75■■□□□ 1.07
Abca4O35600 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Abca4O35600 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Abca4O35600 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Abca4O35600 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Abca4O35600 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Abca4O35600 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Abca4O35600 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.72■■□□□ 1.07
Abca4O35600 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.72■■□□□ 1.07
Abca4O35600 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.72■■□□□ 1.07
Abca4O35600 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Abca4O35600 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Abca4O35600 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Abca4O35600 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.71■■□□□ 1.07
Abca4O35600 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Abca4O35600 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Abca4O35600 Gm22238-201ENSMUST00000175222 88 ntBASIC21.71■■□□□ 1.07
Abca4O35600 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Abca4O35600 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Abca4O35600 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Abca4O35600 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Abca4O35600 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.7■■□□□ 1.06
Abca4O35600 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Abca4O35600 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Abca4O35600 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Abca4O35600 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Abca4O35600 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Abca4O35600 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.69■■□□□ 1.06
Abca4O35600 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
Abca4O35600 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Abca4O35600 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
Abca4O35600 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Abca4O35600 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.66■■□□□ 1.06
Abca4O35600 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
Abca4O35600 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.66■■□□□ 1.06
Abca4O35600 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Abca4O35600 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Abca4O35600 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Abca4O35600 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Abca4O35600 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.65■■□□□ 1.06
Abca4O35600 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Abca4O35600 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Abca4O35600 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Abca4O35600 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Abca4O35600 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Abca4O35600 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.64■■□□□ 1.05
Abca4O35600 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Abca4O35600 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Abca4O35600 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Abca4O35600 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Abca4O35600 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Abca4O35600 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.63■■□□□ 1.05
Abca4O35600 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Abca4O35600 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Abca4O35600 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Abca4O35600 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Abca4O35600 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
Abca4O35600 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Abca4O35600 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Abca4O35600 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Abca4O35600 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Abca4O35600 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.6■■□□□ 1.05
Abca4O35600 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Abca4O35600 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.6■■□□□ 1.05
Abca4O35600 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms