Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsf11O35235 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsf11O35235 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsf11O35235 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsf11O35235 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Tnfsf11O35235 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.39■□□□□ 0.37
Tnfsf11O35235 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Tnfsf11O35235 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.39■□□□□ 0.37
Tnfsf11O35235 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Tnfsf11O35235 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.38■□□□□ 0.37
Tnfsf11O35235 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsf11O35235 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf11O35235 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf11O35235 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tnfsf11O35235 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.37■□□□□ 0.37
Tnfsf11O35235 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Tnfsf11O35235 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf11O35235 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf11O35235 Gm9397-201ENSMUST00000200125 605 ntBASIC17.36■□□□□ 0.37
Tnfsf11O35235 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf11O35235 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.36■□□□□ 0.37
Tnfsf11O35235 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf11O35235 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfsf11O35235 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf11O35235 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Tnfsf11O35235 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf11O35235 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf11O35235 Gm24970-201ENSMUST00000175582 82 ntBASIC17.35■□□□□ 0.37
Tnfsf11O35235 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tnfsf11O35235 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tnfsf11O35235 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf11O35235 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf11O35235 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf11O35235 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tnfsf11O35235 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf11O35235 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.34■□□□□ 0.37
Tnfsf11O35235 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.34■□□□□ 0.37
Tnfsf11O35235 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.34■□□□□ 0.37
Tnfsf11O35235 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tnfsf11O35235 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf11O35235 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf11O35235 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfsf11O35235 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfsf11O35235 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Tnfsf11O35235 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tnfsf11O35235 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfsf11O35235 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfsf11O35235 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfsf11O35235 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfsf11O35235 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tnfsf11O35235 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfsf11O35235 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfsf11O35235 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfsf11O35235 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfsf11O35235 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfsf11O35235 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfsf11O35235 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.31■□□□□ 0.36
Tnfsf11O35235 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfsf11O35235 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfsf11O35235 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfsf11O35235 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tnfsf11O35235 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsf11O35235 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsf11O35235 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsf11O35235 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsf11O35235 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsf11O35235 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.29■□□□□ 0.36
Tnfsf11O35235 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.29■□□□□ 0.36
Tnfsf11O35235 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsf11O35235 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsf11O35235 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tnfsf11O35235 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.29■□□□□ 0.36
Tnfsf11O35235 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsf11O35235 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsf11O35235 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsf11O35235 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tnfsf11O35235 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsf11O35235 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsf11O35235 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsf11O35235 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.27■□□□□ 0.36
Tnfsf11O35235 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfsf11O35235 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfsf11O35235 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Tnfsf11O35235 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf11O35235 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf11O35235 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Tnfsf11O35235 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Tnfsf11O35235 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf11O35235 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tnfsf11O35235 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf11O35235 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf11O35235 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf11O35235 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf11O35235 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.25■□□□□ 0.35
Tnfsf11O35235 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf11O35235 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf11O35235 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.24■□□□□ 0.35
Tnfsf11O35235 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsf11O35235 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tnfsf11O35235 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms