Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Tcof1O08784 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tcof1O08784 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tcof1O08784 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Tcof1O08784 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tcof1O08784 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tcof1O08784 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.31■■□□□ 1.8
Tcof1O08784 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tcof1O08784 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tcof1O08784 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Tcof1O08784 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.3■■□□□ 1.8
Tcof1O08784 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tcof1O08784 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.3■■□□□ 1.8
Tcof1O08784 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tcof1O08784 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Tcof1O08784 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tcof1O08784 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Tcof1O08784 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Tcof1O08784 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Tcof1O08784 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.27■■□□□ 1.8
Tcof1O08784 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Tcof1O08784 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
Tcof1O08784 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tcof1O08784 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tcof1O08784 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Tcof1O08784 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Tcof1O08784 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tcof1O08784 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Tcof1O08784 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Tcof1O08784 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.23■■□□□ 1.79
Tcof1O08784 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.23■■□□□ 1.79
Tcof1O08784 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tcof1O08784 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tcof1O08784 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tcof1O08784 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tcof1O08784 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Tcof1O08784 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.21■■□□□ 1.79
Tcof1O08784 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tcof1O08784 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Tcof1O08784 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Tcof1O08784 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Tcof1O08784 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.19■■□□□ 1.78
Tcof1O08784 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.19■■□□□ 1.78
Tcof1O08784 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Tcof1O08784 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Tcof1O08784 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Tcof1O08784 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Tcof1O08784 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Tcof1O08784 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tcof1O08784 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tcof1O08784 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tcof1O08784 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.16■■□□□ 1.78
Tcof1O08784 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Tcof1O08784 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Tcof1O08784 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Tcof1O08784 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.16■■□□□ 1.78
Tcof1O08784 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Tcof1O08784 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.16■■□□□ 1.78
Tcof1O08784 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Tcof1O08784 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tcof1O08784 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tcof1O08784 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tcof1O08784 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tcof1O08784 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Tcof1O08784 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tcof1O08784 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Tcof1O08784 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.14■■□□□ 1.77
Tcof1O08784 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Tcof1O08784 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.13■■□□□ 1.77
Tcof1O08784 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tcof1O08784 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tcof1O08784 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Tcof1O08784 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tcof1O08784 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Tcof1O08784 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Tcof1O08784 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.12■■□□□ 1.77
Tcof1O08784 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tcof1O08784 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Tcof1O08784 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tcof1O08784 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Tcof1O08784 Gm10420-201ENSMUST00000121713 882 ntBASIC26.12■■□□□ 1.77
Tcof1O08784 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.12■■□□□ 1.77
Tcof1O08784 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Tcof1O08784 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Tcof1O08784 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Tcof1O08784 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tcof1O08784 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tcof1O08784 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.09■■□□□ 1.77
Tcof1O08784 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tcof1O08784 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Tcof1O08784 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Tcof1O08784 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Tcof1O08784 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Tcof1O08784 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.08■■□□□ 1.77
Tcof1O08784 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
Tcof1O08784 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.07■■□□□ 1.76
Tcof1O08784 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Tcof1O08784 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tcof1O08784 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Tcof1O08784 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms