Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.61■■□□□ 1.69
B020004C17RikJ3QP07 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
B020004C17RikJ3QP07 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
B020004C17RikJ3QP07 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
B020004C17RikJ3QP07 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
B020004C17RikJ3QP07 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
B020004C17RikJ3QP07 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
B020004C17RikJ3QP07 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
B020004C17RikJ3QP07 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
B020004C17RikJ3QP07 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
B020004C17RikJ3QP07 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
B020004C17RikJ3QP07 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
B020004C17RikJ3QP07 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
B020004C17RikJ3QP07 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
B020004C17RikJ3QP07 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
B020004C17RikJ3QP07 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
B020004C17RikJ3QP07 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
B020004C17RikJ3QP07 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
B020004C17RikJ3QP07 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
B020004C17RikJ3QP07 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
B020004C17RikJ3QP07 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
B020004C17RikJ3QP07 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
B020004C17RikJ3QP07 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
B020004C17RikJ3QP07 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.55■■□□□ 1.68
B020004C17RikJ3QP07 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.55■■□□□ 1.68
B020004C17RikJ3QP07 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
B020004C17RikJ3QP07 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC25.55■■□□□ 1.68
B020004C17RikJ3QP07 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
B020004C17RikJ3QP07 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
B020004C17RikJ3QP07 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
B020004C17RikJ3QP07 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
B020004C17RikJ3QP07 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
B020004C17RikJ3QP07 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
B020004C17RikJ3QP07 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
B020004C17RikJ3QP07 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
B020004C17RikJ3QP07 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
B020004C17RikJ3QP07 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.51■■□□□ 1.67
B020004C17RikJ3QP07 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
B020004C17RikJ3QP07 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
B020004C17RikJ3QP07 Gm7199-201ENSMUST00000118327 1485 ntBASIC25.51■■□□□ 1.67
B020004C17RikJ3QP07 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
B020004C17RikJ3QP07 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
B020004C17RikJ3QP07 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
B020004C17RikJ3QP07 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
B020004C17RikJ3QP07 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
B020004C17RikJ3QP07 Gm10232-201ENSMUST00000089221 720 ntBASIC25.49■■□□□ 1.67
B020004C17RikJ3QP07 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.48■■□□□ 1.67
B020004C17RikJ3QP07 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
B020004C17RikJ3QP07 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
B020004C17RikJ3QP07 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
B020004C17RikJ3QP07 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
B020004C17RikJ3QP07 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
B020004C17RikJ3QP07 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
B020004C17RikJ3QP07 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.47■■□□□ 1.67
B020004C17RikJ3QP07 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
B020004C17RikJ3QP07 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
B020004C17RikJ3QP07 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
B020004C17RikJ3QP07 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.46■■□□□ 1.67
B020004C17RikJ3QP07 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
B020004C17RikJ3QP07 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.46■■□□□ 1.67
B020004C17RikJ3QP07 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
B020004C17RikJ3QP07 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.45■■□□□ 1.66
B020004C17RikJ3QP07 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
B020004C17RikJ3QP07 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
B020004C17RikJ3QP07 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
B020004C17RikJ3QP07 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
B020004C17RikJ3QP07 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
B020004C17RikJ3QP07 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
B020004C17RikJ3QP07 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
B020004C17RikJ3QP07 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
B020004C17RikJ3QP07 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
B020004C17RikJ3QP07 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
B020004C17RikJ3QP07 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
B020004C17RikJ3QP07 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
B020004C17RikJ3QP07 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
B020004C17RikJ3QP07 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
B020004C17RikJ3QP07 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
B020004C17RikJ3QP07 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
B020004C17RikJ3QP07 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
B020004C17RikJ3QP07 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
B020004C17RikJ3QP07 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.41■■□□□ 1.66
B020004C17RikJ3QP07 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
B020004C17RikJ3QP07 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
B020004C17RikJ3QP07 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.41■■□□□ 1.66
B020004C17RikJ3QP07 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.4■■□□□ 1.66
B020004C17RikJ3QP07 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
B020004C17RikJ3QP07 Etf1-202ENSMUST00000180351 108 ntBASIC25.39■■□□□ 1.66
B020004C17RikJ3QP07 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.39■■□□□ 1.66
B020004C17RikJ3QP07 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
B020004C17RikJ3QP07 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
B020004C17RikJ3QP07 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.38■■□□□ 1.65
B020004C17RikJ3QP07 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.38■■□□□ 1.65
B020004C17RikJ3QP07 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
B020004C17RikJ3QP07 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
B020004C17RikJ3QP07 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
B020004C17RikJ3QP07 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.38■■□□□ 1.65
B020004C17RikJ3QP07 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
B020004C17RikJ3QP07 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
B020004C17RikJ3QP07 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.37■■□□□ 1.65
B020004C17RikJ3QP07 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.37■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms