Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.65■□□□□ 0.74
Trav13d-3J3QMG8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trav13d-3J3QMG8 Scarna2-201ENSMUST00000157560 414 ntBASIC19.64■□□□□ 0.73
Trav13d-3J3QMG8 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.64■□□□□ 0.73
Trav13d-3J3QMG8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav13d-3J3QMG8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav13d-3J3QMG8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav13d-3J3QMG8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trav13d-3J3QMG8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav13d-3J3QMG8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav13d-3J3QMG8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav13d-3J3QMG8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Trav13d-3J3QMG8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav13d-3J3QMG8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trav13d-3J3QMG8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trav13d-3J3QMG8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav13d-3J3QMG8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav13d-3J3QMG8 Gm9806-201ENSMUST00000051080 552 ntBASIC19.61■□□□□ 0.73
Trav13d-3J3QMG8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav13d-3J3QMG8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trav13d-3J3QMG8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav13d-3J3QMG8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.6■□□□□ 0.73
Trav13d-3J3QMG8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav13d-3J3QMG8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.6■□□□□ 0.73
Trav13d-3J3QMG8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav13d-3J3QMG8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav13d-3J3QMG8 Gm16437-201ENSMUST00000025669 507 ntBASIC19.6■□□□□ 0.73
Trav13d-3J3QMG8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav13d-3J3QMG8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav13d-3J3QMG8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav13d-3J3QMG8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav13d-3J3QMG8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trav13d-3J3QMG8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav13d-3J3QMG8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.58■□□□□ 0.73
Trav13d-3J3QMG8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.58■□□□□ 0.73
Trav13d-3J3QMG8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trav13d-3J3QMG8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trav13d-3J3QMG8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trav13d-3J3QMG8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav13d-3J3QMG8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav13d-3J3QMG8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.58■□□□□ 0.72
Trav13d-3J3QMG8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trav13d-3J3QMG8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav13d-3J3QMG8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trav13d-3J3QMG8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.57■□□□□ 0.72
Trav13d-3J3QMG8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav13d-3J3QMG8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav13d-3J3QMG8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trav13d-3J3QMG8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav13d-3J3QMG8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13d-3J3QMG8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13d-3J3QMG8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13d-3J3QMG8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13d-3J3QMG8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13d-3J3QMG8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Trav13d-3J3QMG8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13d-3J3QMG8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13d-3J3QMG8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav13d-3J3QMG8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav13d-3J3QMG8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav13d-3J3QMG8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav13d-3J3QMG8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav13d-3J3QMG8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Trav13d-3J3QMG8 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.55■□□□□ 0.72
Trav13d-3J3QMG8 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.54■□□□□ 0.72
Trav13d-3J3QMG8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav13d-3J3QMG8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav13d-3J3QMG8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav13d-3J3QMG8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trav13d-3J3QMG8 Gm11687-201ENSMUST00000118911 886 ntBASIC19.53■□□□□ 0.72
Trav13d-3J3QMG8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.53■□□□□ 0.72
Trav13d-3J3QMG8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav13d-3J3QMG8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.53■□□□□ 0.72
Trav13d-3J3QMG8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trav13d-3J3QMG8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav13d-3J3QMG8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav13d-3J3QMG8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav13d-3J3QMG8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav13d-3J3QMG8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav13d-3J3QMG8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav13d-3J3QMG8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav13d-3J3QMG8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav13d-3J3QMG8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav13d-3J3QMG8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav13d-3J3QMG8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.5■□□□□ 0.71
Trav13d-3J3QMG8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Trav13d-3J3QMG8 Gm44428-201ENSMUST00000204474 874 ntBASIC19.49■□□□□ 0.71
Trav13d-3J3QMG8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trav13d-3J3QMG8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav13d-3J3QMG8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav13d-3J3QMG8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav13d-3J3QMG8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav13d-3J3QMG8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav13d-3J3QMG8 Gm11175-201ENSMUST00000116172 543 ntBASIC19.48■□□□□ 0.71
Trav13d-3J3QMG8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.48■□□□□ 0.71
Trav13d-3J3QMG8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav13d-3J3QMG8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.48■□□□□ 0.71
Trav13d-3J3QMG8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav13d-3J3QMG8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.47■□□□□ 0.71
Trav13d-3J3QMG8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms