Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm20708H3BKF4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.88■□□□□ 0.61
Gm20708H3BKF4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm20708H3BKF4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm20708H3BKF4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm20708H3BKF4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm20708H3BKF4 Gm11687-201ENSMUST00000118911 886 ntBASIC18.87■□□□□ 0.61
Gm20708H3BKF4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.87■□□□□ 0.61
Gm20708H3BKF4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Gm20708H3BKF4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm20708H3BKF4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm20708H3BKF4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm20708H3BKF4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.86■□□□□ 0.61
Gm20708H3BKF4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.86■□□□□ 0.61
Gm20708H3BKF4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm20708H3BKF4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Gm20708H3BKF4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm20708H3BKF4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.85■□□□□ 0.61
Gm20708H3BKF4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm20708H3BKF4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm20708H3BKF4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm20708H3BKF4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm20708H3BKF4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm20708H3BKF4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm20708H3BKF4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm20708H3BKF4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm20708H3BKF4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm20708H3BKF4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm20708H3BKF4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Gm20708H3BKF4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm20708H3BKF4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm20708H3BKF4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gm20708H3BKF4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm20708H3BKF4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm20708H3BKF4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm20708H3BKF4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm20708H3BKF4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm20708H3BKF4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm20708H3BKF4 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.81■□□□□ 0.6
Gm20708H3BKF4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Gm20708H3BKF4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Gm20708H3BKF4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm20708H3BKF4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm20708H3BKF4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.81■□□□□ 0.6
Gm20708H3BKF4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gm20708H3BKF4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gm20708H3BKF4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm20708H3BKF4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm20708H3BKF4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Gm20708H3BKF4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.79■□□□□ 0.6
Gm20708H3BKF4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm20708H3BKF4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm20708H3BKF4 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.78■□□□□ 0.6
Gm20708H3BKF4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm20708H3BKF4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm20708H3BKF4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm20708H3BKF4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm20708H3BKF4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm20708H3BKF4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm20708H3BKF4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gm20708H3BKF4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gm20708H3BKF4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm20708H3BKF4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.76■□□□□ 0.59
Gm20708H3BKF4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm20708H3BKF4 Gm44428-201ENSMUST00000204474 874 ntBASIC18.76■□□□□ 0.59
Gm20708H3BKF4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm20708H3BKF4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm20708H3BKF4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.75■□□□□ 0.59
Gm20708H3BKF4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm20708H3BKF4 Gm27502-201ENSMUST00000183495 199 ntBASIC18.75■□□□□ 0.59
Gm20708H3BKF4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Gm20708H3BKF4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm20708H3BKF4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm20708H3BKF4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm20708H3BKF4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm20708H3BKF4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm20708H3BKF4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm20708H3BKF4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm20708H3BKF4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm20708H3BKF4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm20708H3BKF4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm20708H3BKF4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm20708H3BKF4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Gm20708H3BKF4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm20708H3BKF4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm20708H3BKF4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Gm20708H3BKF4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Gm20708H3BKF4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.72■□□□□ 0.59
Gm20708H3BKF4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm20708H3BKF4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm20708H3BKF4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Gm20708H3BKF4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gm20708H3BKF4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Gm20708H3BKF4 Mir6538-201ENSMUST00000183713 110 ntBASIC18.7■□□□□ 0.58
Gm20708H3BKF4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gm20708H3BKF4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm20708H3BKF4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Gm20708H3BKF4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm20708H3BKF4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm20708H3BKF4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms