Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Scaf11E9PZM7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC32.16■■■□□ 2.74
Scaf11E9PZM7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Scaf11E9PZM7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Scaf11E9PZM7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC32.16■■■□□ 2.74
Scaf11E9PZM7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC32.16■■■□□ 2.74
Scaf11E9PZM7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC32.15■■■□□ 2.74
Scaf11E9PZM7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC32.14■■■□□ 2.74
Scaf11E9PZM7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Scaf11E9PZM7 Gm5131-201ENSMUST00000212776 1238 ntBASIC32.13■■■□□ 2.73
Scaf11E9PZM7 AC117769.4-201ENSMUST00000225679 685 ntBASIC32.13■■■□□ 2.73
Scaf11E9PZM7 Amer2-203ENSMUST00000225247 2662 ntBASIC32.12■■■□□ 2.73
Scaf11E9PZM7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Scaf11E9PZM7 Gm13241-201ENSMUST00000094493 780 ntBASIC32.12■■■□□ 2.73
Scaf11E9PZM7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Scaf11E9PZM7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Scaf11E9PZM7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC32.11■■■□□ 2.73
Scaf11E9PZM7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Scaf11E9PZM7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Scaf11E9PZM7 Gm37847-201ENSMUST00000192163 1497 ntBASIC32.09■■■□□ 2.73
Scaf11E9PZM7 Gm31748-201ENSMUST00000194938 1497 ntBASIC32.09■■■□□ 2.73
Scaf11E9PZM7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
Scaf11E9PZM7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC32.09■■■□□ 2.73
Scaf11E9PZM7 Gm21956-201ENSMUST00000179946 522 ntBASIC32.09■■■□□ 2.73
Scaf11E9PZM7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC32.08■■■□□ 2.73
Scaf11E9PZM7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC32.08■■■□□ 2.73
Scaf11E9PZM7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Scaf11E9PZM7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
Scaf11E9PZM7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Scaf11E9PZM7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Scaf11E9PZM7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Scaf11E9PZM7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Scaf11E9PZM7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Scaf11E9PZM7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Scaf11E9PZM7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC32.05■■■□□ 2.72
Scaf11E9PZM7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Scaf11E9PZM7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC32.04■■■□□ 2.72
Scaf11E9PZM7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Scaf11E9PZM7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Scaf11E9PZM7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC32.03■■■□□ 2.72
Scaf11E9PZM7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Scaf11E9PZM7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC32.03■■■□□ 2.72
Scaf11E9PZM7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
Scaf11E9PZM7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
Scaf11E9PZM7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
Scaf11E9PZM7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC32.01■■■□□ 2.71
Scaf11E9PZM7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Scaf11E9PZM7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
Scaf11E9PZM7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC32.01■■■□□ 2.71
Scaf11E9PZM7 Gm43034-201ENSMUST00000198678 1364 ntBASIC32.01■■■□□ 2.71
Scaf11E9PZM7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Scaf11E9PZM7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Scaf11E9PZM7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC32■■■□□ 2.71
Scaf11E9PZM7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC32■■■□□ 2.71
Scaf11E9PZM7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Scaf11E9PZM7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Scaf11E9PZM7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Scaf11E9PZM7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC31.99■■■□□ 2.71
Scaf11E9PZM7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Scaf11E9PZM7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Scaf11E9PZM7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Scaf11E9PZM7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC31.98■■■□□ 2.71
Scaf11E9PZM7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
Scaf11E9PZM7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Scaf11E9PZM7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Scaf11E9PZM7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC31.96■■■□□ 2.71
Scaf11E9PZM7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31.96■■■□□ 2.71
Scaf11E9PZM7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Scaf11E9PZM7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Scaf11E9PZM7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Scaf11E9PZM7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC31.95■■■□□ 2.71
Scaf11E9PZM7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Scaf11E9PZM7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Scaf11E9PZM7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC31.95■■■□□ 2.7
Scaf11E9PZM7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Scaf11E9PZM7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC31.94■■■□□ 2.7
Scaf11E9PZM7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Scaf11E9PZM7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Scaf11E9PZM7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Scaf11E9PZM7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Scaf11E9PZM7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
Scaf11E9PZM7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Scaf11E9PZM7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Scaf11E9PZM7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Scaf11E9PZM7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Scaf11E9PZM7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
Scaf11E9PZM7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
Scaf11E9PZM7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC31.9■■■□□ 2.7
Scaf11E9PZM7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Scaf11E9PZM7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Scaf11E9PZM7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Scaf11E9PZM7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Scaf11E9PZM7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
Scaf11E9PZM7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC31.87■■■□□ 2.69
Scaf11E9PZM7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Scaf11E9PZM7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC31.85■■■□□ 2.69
Scaf11E9PZM7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC31.85■■■□□ 2.69
Scaf11E9PZM7 Gm4419-202ENSMUST00000226239 1431 ntBASIC31.85■■■□□ 2.69
Scaf11E9PZM7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Scaf11E9PZM7 Gm9847-201ENSMUST00000052528 599 ntBASIC31.84■■■□□ 2.69
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms