Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank1D3YZU1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank1D3YZU1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Shank1D3YZU1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank1D3YZU1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.12■□□□□ 0.81
Shank1D3YZU1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank1D3YZU1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Shank1D3YZU1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.12■□□□□ 0.81
Shank1D3YZU1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shank1D3YZU1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.11■□□□□ 0.81
Shank1D3YZU1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank1D3YZU1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank1D3YZU1 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.1■□□□□ 0.81
Shank1D3YZU1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Shank1D3YZU1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shank1D3YZU1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.09■□□□□ 0.81
Shank1D3YZU1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank1D3YZU1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank1D3YZU1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank1D3YZU1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank1D3YZU1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.08■□□□□ 0.81
Shank1D3YZU1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shank1D3YZU1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Shank1D3YZU1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Shank1D3YZU1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.08■□□□□ 0.8
Shank1D3YZU1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Shank1D3YZU1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.07■□□□□ 0.8
Shank1D3YZU1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shank1D3YZU1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
Shank1D3YZU1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shank1D3YZU1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shank1D3YZU1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Shank1D3YZU1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Shank1D3YZU1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Shank1D3YZU1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shank1D3YZU1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Shank1D3YZU1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.06■□□□□ 0.8
Shank1D3YZU1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shank1D3YZU1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Shank1D3YZU1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Shank1D3YZU1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Shank1D3YZU1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Shank1D3YZU1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.05■□□□□ 0.8
Shank1D3YZU1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Shank1D3YZU1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.04■□□□□ 0.8
Shank1D3YZU1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Shank1D3YZU1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.04■□□□□ 0.8
Shank1D3YZU1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Shank1D3YZU1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Shank1D3YZU1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Shank1D3YZU1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.03■□□□□ 0.8
Shank1D3YZU1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Shank1D3YZU1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Shank1D3YZU1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shank1D3YZU1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Shank1D3YZU1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Shank1D3YZU1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.02■□□□□ 0.8
Shank1D3YZU1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.02■□□□□ 0.8
Shank1D3YZU1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shank1D3YZU1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shank1D3YZU1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shank1D3YZU1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shank1D3YZU1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shank1D3YZU1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.01■□□□□ 0.79
Shank1D3YZU1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shank1D3YZU1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20■□□□□ 0.79
Shank1D3YZU1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shank1D3YZU1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Shank1D3YZU1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shank1D3YZU1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Shank1D3YZU1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shank1D3YZU1 Gm21956-201ENSMUST00000179946 522 ntBASIC20■□□□□ 0.79
Shank1D3YZU1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shank1D3YZU1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shank1D3YZU1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shank1D3YZU1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shank1D3YZU1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shank1D3YZU1 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.98■□□□□ 0.79
Shank1D3YZU1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Shank1D3YZU1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shank1D3YZU1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.98■□□□□ 0.79
Shank1D3YZU1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.98■□□□□ 0.79
Shank1D3YZU1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.98■□□□□ 0.79
Shank1D3YZU1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Shank1D3YZU1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shank1D3YZU1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Shank1D3YZU1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.97■□□□□ 0.79
Shank1D3YZU1 Etf1-202ENSMUST00000180351 108 ntBASIC19.97■□□□□ 0.79
Shank1D3YZU1 Serp2-204ENSMUST00000228055 705 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms