Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubr4A2AN08 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC12.39□□□□□ -0.43
Ubr4A2AN08 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ubr4A2AN08 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.39□□□□□ -0.43
Ubr4A2AN08 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.39□□□□□ -0.43
Ubr4A2AN08 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ubr4A2AN08 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubr4A2AN08 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubr4A2AN08 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubr4A2AN08 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubr4A2AN08 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubr4A2AN08 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubr4A2AN08 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC12.38□□□□□ -0.43
Ubr4A2AN08 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.38□□□□□ -0.43
Ubr4A2AN08 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubr4A2AN08 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubr4A2AN08 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ubr4A2AN08 Gm28731-201ENSMUST00000185564 1569 ntBASIC12.38□□□□□ -0.43
Ubr4A2AN08 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ubr4A2AN08 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubr4A2AN08 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ubr4A2AN08 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr4A2AN08 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.37□□□□□ -0.43
Ubr4A2AN08 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr4A2AN08 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr4A2AN08 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ubr4A2AN08 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ubr4A2AN08 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ubr4A2AN08 Golgb1-201ENSMUST00000023534 498 ntBASIC12.36□□□□□ -0.43
Ubr4A2AN08 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Ubr4A2AN08 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ubr4A2AN08 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ubr4A2AN08 Gm12922-201ENSMUST00000120626 809 ntBASIC12.35□□□□□ -0.43
Ubr4A2AN08 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ubr4A2AN08 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubr4A2AN08 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr4A2AN08 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubr4A2AN08 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr4A2AN08 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ubr4A2AN08 Spcs1-204ENSMUST00000226782 949 ntBASIC12.35□□□□□ -0.43
Ubr4A2AN08 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubr4A2AN08 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC12.35□□□□□ -0.43
Ubr4A2AN08 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr4A2AN08 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ubr4A2AN08 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ubr4A2AN08 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr4A2AN08 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr4A2AN08 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.34□□□□□ -0.43
Ubr4A2AN08 Gm7291-201ENSMUST00000199147 382 ntBASIC12.34□□□□□ -0.43
Ubr4A2AN08 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.34□□□□□ -0.43
Ubr4A2AN08 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.34□□□□□ -0.43
Ubr4A2AN08 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC12.34□□□□□ -0.43
Ubr4A2AN08 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr4A2AN08 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ubr4A2AN08 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC12.33□□□□□ -0.44
Ubr4A2AN08 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubr4A2AN08 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubr4A2AN08 Gm26571-201ENSMUST00000181399 666 ntBASIC12.33□□□□□ -0.44
Ubr4A2AN08 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubr4A2AN08 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC12.33□□□□□ -0.44
Ubr4A2AN08 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubr4A2AN08 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC12.33□□□□□ -0.44
Ubr4A2AN08 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubr4A2AN08 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.32□□□□□ -0.44
Ubr4A2AN08 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubr4A2AN08 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubr4A2AN08 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ubr4A2AN08 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubr4A2AN08 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Ubr4A2AN08 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ubr4A2AN08 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubr4A2AN08 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubr4A2AN08 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubr4A2AN08 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Ubr4A2AN08 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.31□□□□□ -0.44
Ubr4A2AN08 Gm7977-201ENSMUST00000193787 748 ntBASIC12.31□□□□□ -0.44
Ubr4A2AN08 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubr4A2AN08 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubr4A2AN08 Terc-201ENSMUST00000082862 423 ntBASIC12.31□□□□□ -0.44
Ubr4A2AN08 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubr4A2AN08 Gm7417-201ENSMUST00000192950 473 ntBASIC12.31□□□□□ -0.44
Ubr4A2AN08 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubr4A2AN08 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.31□□□□□ -0.44
Ubr4A2AN08 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubr4A2AN08 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubr4A2AN08 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubr4A2AN08 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.3□□□□□ -0.44
Ubr4A2AN08 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubr4A2AN08 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms