Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.01■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Gm14523-201ENSMUST00000117260 558 ntBASIC15.99■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.99■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.99■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-1A0A0G2JEU8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-1A0A0G2JEU8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13n-1A0A0G2JEU8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-1A0A0G2JEU8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav13n-1A0A0G2JEU8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Trav13n-1A0A0G2JEU8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav13n-1A0A0G2JEU8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Gm44428-201ENSMUST00000204474 874 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms