Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trbv20A0A0B4J1H5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv20A0A0B4J1H5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.05■□□□□ 0.8
Trbv20A0A0B4J1H5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trbv20A0A0B4J1H5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv20A0A0B4J1H5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trbv20A0A0B4J1H5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv20A0A0B4J1H5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.05■□□□□ 0.8
Trbv20A0A0B4J1H5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv20A0A0B4J1H5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv20A0A0B4J1H5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv20A0A0B4J1H5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.04■□□□□ 0.8
Trbv20A0A0B4J1H5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv20A0A0B4J1H5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv20A0A0B4J1H5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv20A0A0B4J1H5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv20A0A0B4J1H5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trbv20A0A0B4J1H5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv20A0A0B4J1H5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.02■□□□□ 0.8
Trbv20A0A0B4J1H5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.02■□□□□ 0.8
Trbv20A0A0B4J1H5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Trbv20A0A0B4J1H5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv20A0A0B4J1H5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv20A0A0B4J1H5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv20A0A0B4J1H5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv20A0A0B4J1H5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv20A0A0B4J1H5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv20A0A0B4J1H5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20■□□□□ 0.79
Trbv20A0A0B4J1H5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Trbv20A0A0B4J1H5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv20A0A0B4J1H5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv20A0A0B4J1H5 Gm24970-201ENSMUST00000175582 82 ntBASIC19.99■□□□□ 0.79
Trbv20A0A0B4J1H5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.99■□□□□ 0.79
Trbv20A0A0B4J1H5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.98■□□□□ 0.79
Trbv20A0A0B4J1H5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv20A0A0B4J1H5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv20A0A0B4J1H5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trbv20A0A0B4J1H5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Trbv20A0A0B4J1H5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv20A0A0B4J1H5 Zfp131-205ENSMUST00000223812 663 ntBASIC19.97■□□□□ 0.79
Trbv20A0A0B4J1H5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv20A0A0B4J1H5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.97■□□□□ 0.79
Trbv20A0A0B4J1H5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv20A0A0B4J1H5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv20A0A0B4J1H5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Trbv20A0A0B4J1H5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv20A0A0B4J1H5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv20A0A0B4J1H5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv20A0A0B4J1H5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.95■□□□□ 0.78
Trbv20A0A0B4J1H5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv20A0A0B4J1H5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trbv20A0A0B4J1H5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv20A0A0B4J1H5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Trbv20A0A0B4J1H5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv20A0A0B4J1H5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv20A0A0B4J1H5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv20A0A0B4J1H5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.93■□□□□ 0.78
Trbv20A0A0B4J1H5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv20A0A0B4J1H5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv20A0A0B4J1H5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Trbv20A0A0B4J1H5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv20A0A0B4J1H5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv20A0A0B4J1H5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Trbv20A0A0B4J1H5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.92■□□□□ 0.78
Trbv20A0A0B4J1H5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv20A0A0B4J1H5 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.91■□□□□ 0.78
Trbv20A0A0B4J1H5 Gm9397-201ENSMUST00000200125 605 ntBASIC19.91■□□□□ 0.78
Trbv20A0A0B4J1H5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbv20A0A0B4J1H5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trbv20A0A0B4J1H5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trbv20A0A0B4J1H5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv20A0A0B4J1H5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv20A0A0B4J1H5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv20A0A0B4J1H5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv20A0A0B4J1H5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv20A0A0B4J1H5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv20A0A0B4J1H5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv20A0A0B4J1H5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.89■□□□□ 0.77
Trbv20A0A0B4J1H5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv20A0A0B4J1H5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv20A0A0B4J1H5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv20A0A0B4J1H5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trbv20A0A0B4J1H5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv20A0A0B4J1H5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trbv20A0A0B4J1H5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trbv20A0A0B4J1H5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv20A0A0B4J1H5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv20A0A0B4J1H5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv20A0A0B4J1H5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv20A0A0B4J1H5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv20A0A0B4J1H5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.86■□□□□ 0.77
Trbv20A0A0B4J1H5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv20A0A0B4J1H5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv20A0A0B4J1H5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv20A0A0B4J1H5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Trbv20A0A0B4J1H5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trbv20A0A0B4J1H5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv20A0A0B4J1H5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv20A0A0B4J1H5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trbv20A0A0B4J1H5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 148.3 ms