Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trbv12-1A0A0B4J1H0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.86■□□□□ 0.77
Trbv12-1A0A0B4J1H0 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.86■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.85■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trbv12-1A0A0B4J1H0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.82■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv12-1A0A0B4J1H0 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.82■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.78■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trbv12-1A0A0B4J1H0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.78■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv12-1A0A0B4J1H0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.77■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv12-1A0A0B4J1H0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv12-1A0A0B4J1H0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv12-1A0A0B4J1H0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Gm14523-201ENSMUST00000117260 558 ntBASIC19.73■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv12-1A0A0B4J1H0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.72■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.72■□□□□ 0.75
Trbv12-1A0A0B4J1H0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Trbv12-1A0A0B4J1H0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.71■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Gm27502-201ENSMUST00000183495 199 ntBASIC19.71■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv12-1A0A0B4J1H0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.7■□□□□ 0.74
Trbv12-1A0A0B4J1H0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms