Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.93■□□□□ 0.62
Trav6n-7A0A075B6A6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6n-7A0A075B6A6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav6n-7A0A075B6A6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-7A0A075B6A6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.92■□□□□ 0.62
Trav6n-7A0A075B6A6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav6n-7A0A075B6A6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-7A0A075B6A6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-7A0A075B6A6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-7A0A075B6A6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-7A0A075B6A6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-7A0A075B6A6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6n-7A0A075B6A6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6n-7A0A075B6A6 Gm44428-201ENSMUST00000204474 874 ntBASIC18.91■□□□□ 0.62
Trav6n-7A0A075B6A6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.91■□□□□ 0.62
Trav6n-7A0A075B6A6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6n-7A0A075B6A6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6n-7A0A075B6A6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6n-7A0A075B6A6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav6n-7A0A075B6A6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6n-7A0A075B6A6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6n-7A0A075B6A6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6n-7A0A075B6A6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trav6n-7A0A075B6A6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6n-7A0A075B6A6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6n-7A0A075B6A6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6n-7A0A075B6A6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trav6n-7A0A075B6A6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6n-7A0A075B6A6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6n-7A0A075B6A6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6n-7A0A075B6A6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6n-7A0A075B6A6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.88■□□□□ 0.61
Trav6n-7A0A075B6A6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6n-7A0A075B6A6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.88■□□□□ 0.61
Trav6n-7A0A075B6A6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6n-7A0A075B6A6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6n-7A0A075B6A6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav6n-7A0A075B6A6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.87■□□□□ 0.61
Trav6n-7A0A075B6A6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trav6n-7A0A075B6A6 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.87■□□□□ 0.61
Trav6n-7A0A075B6A6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6n-7A0A075B6A6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6n-7A0A075B6A6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav6n-7A0A075B6A6 Gm27502-201ENSMUST00000183495 199 ntBASIC18.86■□□□□ 0.61
Trav6n-7A0A075B6A6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6n-7A0A075B6A6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6n-7A0A075B6A6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6n-7A0A075B6A6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav6n-7A0A075B6A6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6n-7A0A075B6A6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6n-7A0A075B6A6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6n-7A0A075B6A6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Trav6n-7A0A075B6A6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6n-7A0A075B6A6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6n-7A0A075B6A6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6n-7A0A075B6A6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6n-7A0A075B6A6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav6n-7A0A075B6A6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6n-7A0A075B6A6 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.83■□□□□ 0.61
Trav6n-7A0A075B6A6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav6n-7A0A075B6A6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav6n-7A0A075B6A6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Trav6n-7A0A075B6A6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6n-7A0A075B6A6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trav6n-7A0A075B6A6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6n-7A0A075B6A6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav6n-7A0A075B6A6 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.82■□□□□ 0.6
Trav6n-7A0A075B6A6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trav6n-7A0A075B6A6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6n-7A0A075B6A6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6n-7A0A075B6A6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6n-7A0A075B6A6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.81■□□□□ 0.6
Trav6n-7A0A075B6A6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6n-7A0A075B6A6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6n-7A0A075B6A6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6n-7A0A075B6A6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6n-7A0A075B6A6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6n-7A0A075B6A6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.8■□□□□ 0.6
Trav6n-7A0A075B6A6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6n-7A0A075B6A6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trav6n-7A0A075B6A6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6n-7A0A075B6A6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6n-7A0A075B6A6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6n-7A0A075B6A6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav6n-7A0A075B6A6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6n-7A0A075B6A6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6n-7A0A075B6A6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6n-7A0A075B6A6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6n-7A0A075B6A6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6n-7A0A075B6A6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trav6n-7A0A075B6A6 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.78■□□□□ 0.6
Trav6n-7A0A075B6A6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav6n-7A0A075B6A6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trav6n-7A0A075B6A6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6n-7A0A075B6A6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.77■□□□□ 0.6
Trav6n-7A0A075B6A6 Gm12366-201ENSMUST00000121722 873 ntBASIC18.77■□□□□ 0.6
Trav6n-7A0A075B6A6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.77■□□□□ 0.6
Trav6n-7A0A075B6A6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.77■□□□□ 0.6
Trav6n-7A0A075B6A6 Gm5786-201ENSMUST00000085368 882 ntBASIC18.77■□□□□ 0.6
Trav6n-7A0A075B6A6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms