Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18,48■□□□□ 0,55
Trav5-4A0A075B652 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18,48■□□□□ 0,55
Trav5-4A0A075B652 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18,48■□□□□ 0,55
Trav5-4A0A075B652 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18,47■□□□□ 0,55
Trav5-4A0A075B652 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18,47■□□□□ 0,55
Trav5-4A0A075B652 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18,47■□□□□ 0,55
Trav5-4A0A075B652 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18,47■□□□□ 0,55
Trav5-4A0A075B652 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18,47■□□□□ 0,55
Trav5-4A0A075B652 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18,46■□□□□ 0,55
Trav5-4A0A075B652 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18,46■□□□□ 0,55
Trav5-4A0A075B652 Gm11599-201ENSMUST00000118720 878 ntBASIC18,46■□□□□ 0,55
Trav5-4A0A075B652 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18,46■□□□□ 0,55
Trav5-4A0A075B652 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18,46■□□□□ 0,55
Trav5-4A0A075B652 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18,45■□□□□ 0,54
Trav5-4A0A075B652 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18,44■□□□□ 0,54
Trav5-4A0A075B652 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18,44■□□□□ 0,54
Trav5-4A0A075B652 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18,44■□□□□ 0,54
Trav5-4A0A075B652 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18,44■□□□□ 0,54
Trav5-4A0A075B652 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18,43■□□□□ 0,54
Trav5-4A0A075B652 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18,43■□□□□ 0,54
Trav5-4A0A075B652 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18,43■□□□□ 0,54
Trav5-4A0A075B652 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18,43■□□□□ 0,54
Trav5-4A0A075B652 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18,43■□□□□ 0,54
Trav5-4A0A075B652 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18,43■□□□□ 0,54
Trav5-4A0A075B652 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18,42■□□□□ 0,54
Trav5-4A0A075B652 Mir3960-201ENSMUST00000198213 73 ntBASIC18,42■□□□□ 0,54
Trav5-4A0A075B652 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18,42■□□□□ 0,54
Trav5-4A0A075B652 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18,42■□□□□ 0,54
Trav5-4A0A075B652 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18,42■□□□□ 0,54
Trav5-4A0A075B652 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18,42■□□□□ 0,54
Trav5-4A0A075B652 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18,42■□□□□ 0,54
Trav5-4A0A075B652 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18,42■□□□□ 0,54
Trav5-4A0A075B652 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18,42■□□□□ 0,54
Trav5-4A0A075B652 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18,41■□□□□ 0,54
Trav5-4A0A075B652 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18,41■□□□□ 0,54
Trav5-4A0A075B652 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18,41■□□□□ 0,54
Trav5-4A0A075B652 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18,41■□□□□ 0,54
Trav5-4A0A075B652 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18,41■□□□□ 0,54
Trav5-4A0A075B652 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18,41■□□□□ 0,54
Trav5-4A0A075B652 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18,4■□□□□ 0,54
Trav5-4A0A075B652 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18,4■□□□□ 0,54
Trav5-4A0A075B652 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18,4■□□□□ 0,54
Trav5-4A0A075B652 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18,4■□□□□ 0,54
Trav5-4A0A075B652 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18,4■□□□□ 0,54
Trav5-4A0A075B652 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18,4■□□□□ 0,54
Trav5-4A0A075B652 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18,4■□□□□ 0,54
Trav5-4A0A075B652 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18,4■□□□□ 0,54
Trav5-4A0A075B652 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18,39■□□□□ 0,53
Trav5-4A0A075B652 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18,39■□□□□ 0,53
Trav5-4A0A075B652 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18,39■□□□□ 0,53
Trav5-4A0A075B652 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18,39■□□□□ 0,53
Trav5-4A0A075B652 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18,39■□□□□ 0,53
Trav5-4A0A075B652 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18,39■□□□□ 0,53
Trav5-4A0A075B652 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18,38■□□□□ 0,53
Trav5-4A0A075B652 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18,38■□□□□ 0,53
Trav5-4A0A075B652 Gm9812-201ENSMUST00000061934 968 ntBASIC18,38■□□□□ 0,53
Trav5-4A0A075B652 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18,38■□□□□ 0,53
Trav5-4A0A075B652 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18,38■□□□□ 0,53
Trav5-4A0A075B652 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18,38■□□□□ 0,53
Trav5-4A0A075B652 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18,38■□□□□ 0,53
Trav5-4A0A075B652 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18,38■□□□□ 0,53
Trav5-4A0A075B652 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18,37■□□□□ 0,53
Trav5-4A0A075B652 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18,37■□□□□ 0,53
Trav5-4A0A075B652 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18,37■□□□□ 0,53
Trav5-4A0A075B652 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18,37■□□□□ 0,53
Trav5-4A0A075B652 AC154454.1-201ENSMUST00000225253 216 ntBASIC18,37■□□□□ 0,53
Trav5-4A0A075B652 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18,37■□□□□ 0,53
Trav5-4A0A075B652 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18,37■□□□□ 0,53
Trav5-4A0A075B652 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18,37■□□□□ 0,53
Trav5-4A0A075B652 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18,37■□□□□ 0,53
Trav5-4A0A075B652 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18,37■□□□□ 0,53
Trav5-4A0A075B652 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18,36■□□□□ 0,53
Trav5-4A0A075B652 Gm12818-201ENSMUST00000117562 1349 ntBASIC18,36■□□□□ 0,53
Trav5-4A0A075B652 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18,36■□□□□ 0,53
Trav5-4A0A075B652 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18,36■□□□□ 0,53
Trav5-4A0A075B652 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18,35■□□□□ 0,53
Trav5-4A0A075B652 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18,35■□□□□ 0,53
Trav5-4A0A075B652 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18,35■□□□□ 0,53
Trav5-4A0A075B652 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18,35■□□□□ 0,53
Trav5-4A0A075B652 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18,35■□□□□ 0,53
Trav5-4A0A075B652 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18,35■□□□□ 0,53
Trav5-4A0A075B652 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18,34■□□□□ 0,53
Trav5-4A0A075B652 Gm45364-201ENSMUST00000210883 159 ntBASIC18,34■□□□□ 0,53
Trav5-4A0A075B652 AC153911.1-201ENSMUST00000220378 758 ntBASIC18,34■□□□□ 0,53
Trav5-4A0A075B652 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18,34■□□□□ 0,53
Trav5-4A0A075B652 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18,34■□□□□ 0,53
Trav5-4A0A075B652 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18,34■□□□□ 0,53
Trav5-4A0A075B652 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18,33■□□□□ 0,53
Trav5-4A0A075B652 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18,33■□□□□ 0,53
Trav5-4A0A075B652 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18,33■□□□□ 0,52
Trav5-4A0A075B652 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18,33■□□□□ 0,52
Trav5-4A0A075B652 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18,33■□□□□ 0,52
Trav5-4A0A075B652 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18,33■□□□□ 0,52
Trav5-4A0A075B652 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18,33■□□□□ 0,52
Trav5-4A0A075B652 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18,33■□□□□ 0,52
Trav5-4A0A075B652 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18,33■□□□□ 0,52
Trav5-4A0A075B652 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18,33■□□□□ 0,52
Trav5-4A0A075B652 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18,33■□□□□ 0,52
Trav5-4A0A075B652 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18,33■□□□□ 0,52
Trav5-4A0A075B652 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18,32■□□□□ 0,52
Retrieved 100 of 76,532 protein–RNA pairs in 16,1 ms