Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav12-3A0A075B648 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav12-3A0A075B648 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-3A0A075B648 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav12-3A0A075B648 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.38■□□□□ 0.21
Trav12-3A0A075B648 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-3A0A075B648 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.38■□□□□ 0.21
Trav12-3A0A075B648 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-3A0A075B648 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-3A0A075B648 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav12-3A0A075B648 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Trav12-3A0A075B648 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-3A0A075B648 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-3A0A075B648 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav12-3A0A075B648 Particl-201ENSMUST00000205370 1560 ntBASIC16.37■□□□□ 0.21
Trav12-3A0A075B648 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-3A0A075B648 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav12-3A0A075B648 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-3A0A075B648 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-3A0A075B648 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.36■□□□□ 0.21
Trav12-3A0A075B648 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav12-3A0A075B648 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-3A0A075B648 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-3A0A075B648 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.35■□□□□ 0.21
Trav12-3A0A075B648 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav12-3A0A075B648 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12-3A0A075B648 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.34■□□□□ 0.21
Trav12-3A0A075B648 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12-3A0A075B648 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav12-3A0A075B648 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav12-3A0A075B648 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav12-3A0A075B648 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.33■□□□□ 0.21
Trav12-3A0A075B648 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav12-3A0A075B648 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav12-3A0A075B648 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12-3A0A075B648 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav12-3A0A075B648 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav12-3A0A075B648 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav12-3A0A075B648 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-3A0A075B648 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav12-3A0A075B648 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-3A0A075B648 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-3A0A075B648 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav12-3A0A075B648 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav12-3A0A075B648 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trav12-3A0A075B648 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-3A0A075B648 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-3A0A075B648 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-3A0A075B648 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav12-3A0A075B648 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trav12-3A0A075B648 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-3A0A075B648 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav12-3A0A075B648 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.3■□□□□ 0.2
Trav12-3A0A075B648 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-3A0A075B648 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav12-3A0A075B648 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-3A0A075B648 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-3A0A075B648 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav12-3A0A075B648 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-3A0A075B648 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-3A0A075B648 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-3A0A075B648 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-3A0A075B648 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.29■□□□□ 0.2
Trav12-3A0A075B648 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav12-3A0A075B648 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav12-3A0A075B648 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-3A0A075B648 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-3A0A075B648 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-3A0A075B648 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-3A0A075B648 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav12-3A0A075B648 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav12-3A0A075B648 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-3A0A075B648 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-3A0A075B648 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Trav12-3A0A075B648 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav12-3A0A075B648 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav12-3A0A075B648 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-3A0A075B648 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-3A0A075B648 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-3A0A075B648 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-3A0A075B648 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-3A0A075B648 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav12-3A0A075B648 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-3A0A075B648 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav12-3A0A075B648 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12-3A0A075B648 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12-3A0A075B648 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12-3A0A075B648 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav12-3A0A075B648 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-3A0A075B648 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-3A0A075B648 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-3A0A075B648 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-3A0A075B648 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-3A0A075B648 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav12-3A0A075B648 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.24■□□□□ 0.19
Trav12-3A0A075B648 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-3A0A075B648 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav12-3A0A075B648 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Trav12-3A0A075B648 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav12-3A0A075B648 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms