Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav4-2A0A075B638 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav4-2A0A075B638 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav4-2A0A075B638 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav4-2A0A075B638 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav4-2A0A075B638 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav4-2A0A075B638 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trav4-2A0A075B638 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav4-2A0A075B638 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4-2A0A075B638 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav4-2A0A075B638 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4-2A0A075B638 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav4-2A0A075B638 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav4-2A0A075B638 Gm24970-201ENSMUST00000175582 82 ntBASIC17.72■□□□□ 0.43
Trav4-2A0A075B638 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav4-2A0A075B638 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav4-2A0A075B638 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-2A0A075B638 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-2A0A075B638 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-2A0A075B638 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-2A0A075B638 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trav4-2A0A075B638 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-2A0A075B638 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav4-2A0A075B638 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.7■□□□□ 0.42
Trav4-2A0A075B638 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-2A0A075B638 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-2A0A075B638 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-2A0A075B638 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav4-2A0A075B638 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-2A0A075B638 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav4-2A0A075B638 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav4-2A0A075B638 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav4-2A0A075B638 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav4-2A0A075B638 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-2A0A075B638 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.68■□□□□ 0.42
Trav4-2A0A075B638 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-2A0A075B638 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Trav4-2A0A075B638 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-2A0A075B638 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.68■□□□□ 0.42
Trav4-2A0A075B638 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav4-2A0A075B638 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-2A0A075B638 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-2A0A075B638 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trav4-2A0A075B638 Zfp131-205ENSMUST00000223812 663 ntBASIC17.67■□□□□ 0.42
Trav4-2A0A075B638 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav4-2A0A075B638 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-2A0A075B638 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-2A0A075B638 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-2A0A075B638 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.66■□□□□ 0.42
Trav4-2A0A075B638 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-2A0A075B638 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-2A0A075B638 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-2A0A075B638 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav4-2A0A075B638 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav4-2A0A075B638 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav4-2A0A075B638 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav4-2A0A075B638 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav4-2A0A075B638 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-2A0A075B638 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.64■□□□□ 0.41
Trav4-2A0A075B638 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-2A0A075B638 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-2A0A075B638 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trav4-2A0A075B638 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trav4-2A0A075B638 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Trav4-2A0A075B638 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav4-2A0A075B638 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav4-2A0A075B638 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav4-2A0A075B638 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav4-2A0A075B638 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav4-2A0A075B638 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav4-2A0A075B638 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav4-2A0A075B638 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav4-2A0A075B638 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav4-2A0A075B638 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav4-2A0A075B638 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav4-2A0A075B638 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav4-2A0A075B638 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav4-2A0A075B638 Gm9397-201ENSMUST00000200125 605 ntBASIC17.6■□□□□ 0.41
Trav4-2A0A075B638 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav4-2A0A075B638 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav4-2A0A075B638 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav4-2A0A075B638 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-2A0A075B638 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-2A0A075B638 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-2A0A075B638 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-2A0A075B638 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-2A0A075B638 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-2A0A075B638 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav4-2A0A075B638 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Trav4-2A0A075B638 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav4-2A0A075B638 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.58■□□□□ 0.41
Trav4-2A0A075B638 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.58■□□□□ 0.41
Trav4-2A0A075B638 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav4-2A0A075B638 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav4-2A0A075B638 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav4-2A0A075B638 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-2A0A075B638 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.57■□□□□ 0.4
Trav4-2A0A075B638 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.57■□□□□ 0.4
Trav4-2A0A075B638 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-2A0A075B638 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms