Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav16nA0A075B634 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav16nA0A075B634 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav16nA0A075B634 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16nA0A075B634 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav16nA0A075B634 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16nA0A075B634 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16nA0A075B634 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16nA0A075B634 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16nA0A075B634 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16nA0A075B634 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav16nA0A075B634 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav16nA0A075B634 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trav16nA0A075B634 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav16nA0A075B634 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav16nA0A075B634 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav16nA0A075B634 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav16nA0A075B634 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav16nA0A075B634 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav16nA0A075B634 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav16nA0A075B634 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.82■□□□□ 0.28
Trav16nA0A075B634 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16nA0A075B634 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16nA0A075B634 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16nA0A075B634 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16nA0A075B634 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav16nA0A075B634 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav16nA0A075B634 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav16nA0A075B634 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16nA0A075B634 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav16nA0A075B634 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16nA0A075B634 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16nA0A075B634 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16nA0A075B634 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav16nA0A075B634 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav16nA0A075B634 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav16nA0A075B634 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav16nA0A075B634 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav16nA0A075B634 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav16nA0A075B634 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav16nA0A075B634 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav16nA0A075B634 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16nA0A075B634 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav16nA0A075B634 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav16nA0A075B634 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav16nA0A075B634 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav16nA0A075B634 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.76■□□□□ 0.27
Trav16nA0A075B634 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16nA0A075B634 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16nA0A075B634 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16nA0A075B634 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav16nA0A075B634 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav16nA0A075B634 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav16nA0A075B634 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav16nA0A075B634 Gm45855-201ENSMUST00000212546 880 ntBASIC16.74■□□□□ 0.27
Trav16nA0A075B634 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav16nA0A075B634 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16nA0A075B634 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16nA0A075B634 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16nA0A075B634 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav16nA0A075B634 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav16nA0A075B634 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav16nA0A075B634 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav16nA0A075B634 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav16nA0A075B634 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav16nA0A075B634 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.72■□□□□ 0.27
Trav16nA0A075B634 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav16nA0A075B634 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.72■□□□□ 0.27
Trav16nA0A075B634 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav16nA0A075B634 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav16nA0A075B634 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav16nA0A075B634 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav16nA0A075B634 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav16nA0A075B634 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav16nA0A075B634 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav16nA0A075B634 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16nA0A075B634 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Trav16nA0A075B634 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav16nA0A075B634 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav16nA0A075B634 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16nA0A075B634 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16nA0A075B634 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav16nA0A075B634 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav16nA0A075B634 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16nA0A075B634 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16nA0A075B634 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16nA0A075B634 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.69■□□□□ 0.26
Trav16nA0A075B634 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16nA0A075B634 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16nA0A075B634 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16nA0A075B634 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16nA0A075B634 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16nA0A075B634 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav16nA0A075B634 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16nA0A075B634 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav16nA0A075B634 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.68■□□□□ 0.26
Trav16nA0A075B634 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav16nA0A075B634 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav16nA0A075B634 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16nA0A075B634 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 1603.5 ms