Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Trav13d-1A0A075B606 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav13d-1A0A075B606 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.22■□□□□ 0.19
Trav13d-1A0A075B606 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13d-1A0A075B606 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13d-1A0A075B606 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13d-1A0A075B606 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav13d-1A0A075B606 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13d-1A0A075B606 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13d-1A0A075B606 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav13d-1A0A075B606 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav13d-1A0A075B606 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-1A0A075B606 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-1A0A075B606 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-1A0A075B606 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-1A0A075B606 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-1A0A075B606 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-1A0A075B606 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-1A0A075B606 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-1A0A075B606 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav13d-1A0A075B606 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-1A0A075B606 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-1A0A075B606 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trav13d-1A0A075B606 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Trav13d-1A0A075B606 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-1A0A075B606 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-1A0A075B606 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-1A0A075B606 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.17■□□□□ 0.18
Trav13d-1A0A075B606 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav13d-1A0A075B606 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav13d-1A0A075B606 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-1A0A075B606 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-1A0A075B606 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13d-1A0A075B606 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13d-1A0A075B606 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13d-1A0A075B606 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13d-1A0A075B606 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13d-1A0A075B606 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13d-1A0A075B606 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13d-1A0A075B606 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13d-1A0A075B606 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Trav13d-1A0A075B606 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13d-1A0A075B606 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13d-1A0A075B606 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13d-1A0A075B606 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13d-1A0A075B606 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13d-1A0A075B606 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13d-1A0A075B606 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13d-1A0A075B606 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13d-1A0A075B606 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13d-1A0A075B606 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13d-1A0A075B606 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13d-1A0A075B606 Gm44428-201ENSMUST00000204474 874 ntBASIC16.13■□□□□ 0.17
Trav13d-1A0A075B606 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13d-1A0A075B606 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13d-1A0A075B606 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13d-1A0A075B606 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13d-1A0A075B606 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13d-1A0A075B606 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav13d-1A0A075B606 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13d-1A0A075B606 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13d-1A0A075B606 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav13d-1A0A075B606 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13d-1A0A075B606 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13d-1A0A075B606 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13d-1A0A075B606 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13d-1A0A075B606 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav13d-1A0A075B606 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav13d-1A0A075B606 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-1A0A075B606 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trav13d-1A0A075B606 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-1A0A075B606 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-1A0A075B606 Gm10420-201ENSMUST00000121713 882 ntBASIC16.1■□□□□ 0.17
Trav13d-1A0A075B606 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-1A0A075B606 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav13d-1A0A075B606 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav13d-1A0A075B606 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-1A0A075B606 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-1A0A075B606 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms